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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
153.2
nTPM
Monaco:
347.2
nTPM
Schmiedel:
1597.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
153.2
HPA sample
nTPM
gdT-cell nTPM: 136.9
Samples: 6
Max nTPM: 166.7
Min nTPM: 91.6
P10809_1007
115.8
P10809_1022
166.7
P10809_1041
165.8
P10809_1060
153.4
P10809_1077
127.8
P10809_1098
91.6
MAIT T-cell nTPM: 153.2
Samples: 6
Max nTPM: 176.0
Min nTPM: 137.8
P10809_1006
163.2
P10809_1024
137.8
P10809_1043
176.0
P10809_1062
152.3
P10809_1083
144.8
P10809_1097
144.9
Memory CD4 T-cell nTPM: 118.9
Samples: 6
Max nTPM: 161.5
Min nTPM: 93.9
P10809_1014
110.7
P10809_1026
117.8
P10809_1045
161.5
P10809_1064
118.7
P10809_1086
93.9
P10809_1113
110.5
Memory CD8 T-cell nTPM: 122.0
Samples: 5
Max nTPM: 149.4
Min nTPM: 92.4
P10809_1012
143.4
P10809_1027
106.9
P10809_1046
149.4
P10809_1065
92.4
P10809_1111
117.9
Naive CD4 T-cell nTPM: 130.9
Samples: 6
Max nTPM: 166.3
Min nTPM: 95.1
P10809_1015
153.6
P10809_1030
137.7
P10809_1049
114.1
P10809_1068
166.3
P10809_1085
95.1
P10809_1112
118.3
Naive CD8 T-cell nTPM: 114.8
Samples: 6
Max nTPM: 138.7
Min nTPM: 93.2
P10809_1016
138.7
P10809_1031
114.7
P10809_1050
115.1
P10809_1069
122.0
P10809_1087
93.2
P10809_1110
105.0
T-reg nTPM: 102.7
Samples: 6
Max nTPM: 120.1
Min nTPM: 77.1
P10809_1018
115.7
P10809_1037
91.2
P10809_1056
77.1
P10809_1075
120.1
P10809_1094
95.6
P10809_1106
116.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
347.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 285.3
Samples: 4
Max nTPM: 339.4
Min nTPM: 224.3
RHH5202_R3573
224.3
RHH5230_R3602
339.4
RHH5259_R3631
325.1
RHH5288_R3660
252.2
Effector memory CD8 T-cell nTPM: 318.0
Samples: 4
Max nTPM: 339.9
Min nTPM: 287.0
RHH5203_R3574
320.7
RHH5231_R3603
287.0
RHH5260_R3632
324.3
RHH5289_R3661
339.9
MAIT T-cell nTPM: 290.5
Samples: 4
Max nTPM: 349.0
Min nTPM: 243.4
RHH5233_R3605
349.0
RHH5205_R3576
321.3
RHH5262_R3634
243.4
RHH5297_R3663
248.1
Memory CD4 T-cell TFH nTPM: 261.0
Samples: 4
Max nTPM: 302.1
Min nTPM: 230.6
RHH5300_R3666
237.2
RHH5236_R3608
230.6
RHH5265_R3637
302.1
RHH5208_R3579
273.9
Memory CD4 T-cell Th1 nTPM: 291.2
Samples: 4
Max nTPM: 320.3
Min nTPM: 238.9
RHH5210_R3581
291.0
RHH5302_R3668
238.9
RHH5238_R3610
314.7
RHH5267_R3639
320.3
Memory CD4 T-cell Th1/Th17 nTPM: 330.8
Samples: 4
Max nTPM: 400.8
Min nTPM: 283.0
RHH5303_R3669
283.0
RHH5211_R3582
318.9
RHH5239_R3611
400.8
RHH5268_R3640
320.4
Memory CD4 T-cell Th17 nTPM: 347.2
Samples: 4
Max nTPM: 487.9
Min nTPM: 277.8
RHH5304_R3670
305.5
RHH5212_R3583
277.8
RHH5240_R3612
487.9
RHH5269_R3641
317.7
Memory CD4 T-cell Th2 nTPM: 316.1
Samples: 4
Max nTPM: 362.3
Min nTPM: 269.2
RHH5305_R3671
311.4
RHH5213_R3584
362.3
RHH5241_R3613
269.2
RHH5270_R3642
321.5
Naive CD4 T-cell nTPM: 328.5
Samples: 4
Max nTPM: 395.6
Min nTPM: 273.4
RHH5306_R3672
295.4
RHH5214_R3585
273.4
RHH5242_R3614
349.5
RHH5271_R3643
395.6
Naive CD8 T-cell nTPM: 322.4
Samples: 4
Max nTPM: 365.7
Min nTPM: 293.1
RHH5201_R3572
293.1
RHH5229_R3601
365.7
RHH5258_R3630
325.9
RHH5287_R3659
304.7
Non-Vd2 gdTCR nTPM: 311.1
Samples: 4
Max nTPM: 348.1
Min nTPM: 246.0
RHH5235_R3607
348.1
RHH5264_R3636
305.7
RHH5207_R3578
344.7
RHH5299_R3665
246.0
T-reg nTPM: 268.9
Samples: 4
Max nTPM: 294.7
Min nTPM: 233.3
RHH5301_R3667
233.3
RHH5237_R3609
257.5
RHH5266_R3638
294.7
RHH5209_R3580
290.2
Terminal effector memory CD4 T-cell nTPM: 335.0
Samples: 2
Max nTPM: 368.4
Min nTPM: 301.6
RHH5243_R3615
368.4
RHH5272_R3644
301.6
Terminal effector memory CD8 T-cell nTPM: 310.0
Samples: 4
Max nTPM: 371.4
Min nTPM: 260.7
RHH5232_R3604
331.1
RHH5204_R3575
260.7
RHH5261_R3633
371.4
RHH5296_R3662
276.8
Vd2 gdTCR nTPM: 276.8
Samples: 4
Max nTPM: 348.3
Min nTPM: 239.3
RHH5234_R3606
249.7
RHH5206_R3577
239.3
RHH5263_R3635
348.3
RHH5298_R3664
269.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.