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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
137.8
nTPM
Monaco:
527.9
nTPM
Schmiedel:
552.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
137.8
HPA sample
nTPM
gdT-cell nTPM: 137.8
Samples: 6
Max nTPM: 152.3
Min nTPM: 116.4
P10809_1007
129.1
P10809_1022
149.4
P10809_1041
152.3
P10809_1060
147.1
P10809_1077
116.4
P10809_1098
132.7
MAIT T-cell nTPM: 93.5
Samples: 6
Max nTPM: 119.0
Min nTPM: 73.9
P10809_1006
119.0
P10809_1024
98.1
P10809_1043
85.7
P10809_1062
84.6
P10809_1083
73.9
P10809_1097
99.5
Memory CD4 T-cell nTPM: 71.8
Samples: 6
Max nTPM: 80.2
Min nTPM: 64.1
P10809_1014
80.2
P10809_1026
75.8
P10809_1045
64.1
P10809_1064
69.8
P10809_1086
69.4
P10809_1113
71.7
Memory CD8 T-cell nTPM: 108.1
Samples: 5
Max nTPM: 126.4
Min nTPM: 91.6
P10809_1012
126.4
P10809_1027
100.7
P10809_1046
118.3
P10809_1065
91.6
P10809_1111
103.4
Naive CD4 T-cell nTPM: 50.8
Samples: 6
Max nTPM: 62.8
Min nTPM: 38.5
P10809_1015
62.8
P10809_1030
48.7
P10809_1049
38.5
P10809_1068
46.5
P10809_1085
53.5
P10809_1112
55.0
Naive CD8 T-cell nTPM: 80.2
Samples: 6
Max nTPM: 93.2
Min nTPM: 67.0
P10809_1016
83.4
P10809_1031
67.0
P10809_1050
79.4
P10809_1069
88.0
P10809_1087
93.2
P10809_1110
70.1
T-reg nTPM: 80.4
Samples: 6
Max nTPM: 110.5
Min nTPM: 55.1
P10809_1018
110.5
P10809_1037
55.1
P10809_1056
80.4
P10809_1075
68.0
P10809_1094
104.0
P10809_1106
64.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
527.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 325.6
Samples: 4
Max nTPM: 386.3
Min nTPM: 258.9
RHH5202_R3573
258.9
RHH5230_R3602
386.3
RHH5259_R3631
356.8
RHH5288_R3660
300.5
Effector memory CD8 T-cell nTPM: 455.6
Samples: 4
Max nTPM: 492.5
Min nTPM: 409.4
RHH5203_R3574
409.4
RHH5231_R3603
455.0
RHH5260_R3632
465.5
RHH5289_R3661
492.5
MAIT T-cell nTPM: 380.3
Samples: 4
Max nTPM: 405.6
Min nTPM: 365.2
RHH5233_R3605
382.9
RHH5205_R3576
405.6
RHH5262_R3634
365.2
RHH5297_R3663
367.3
Memory CD4 T-cell TFH nTPM: 329.3
Samples: 4
Max nTPM: 347.2
Min nTPM: 311.7
RHH5300_R3666
311.9
RHH5236_R3608
311.7
RHH5265_R3637
346.3
RHH5208_R3579
347.2
Memory CD4 T-cell Th1 nTPM: 323.7
Samples: 4
Max nTPM: 360.8
Min nTPM: 295.0
RHH5210_R3581
304.9
RHH5302_R3668
295.0
RHH5238_R3610
360.8
RHH5267_R3639
334.1
Memory CD4 T-cell Th1/Th17 nTPM: 335.5
Samples: 4
Max nTPM: 370.5
Min nTPM: 296.1
RHH5303_R3669
370.5
RHH5211_R3582
336.8
RHH5239_R3611
338.7
RHH5268_R3640
296.1
Memory CD4 T-cell Th17 nTPM: 367.0
Samples: 4
Max nTPM: 448.9
Min nTPM: 298.7
RHH5304_R3670
407.7
RHH5212_R3583
312.8
RHH5240_R3612
448.9
RHH5269_R3641
298.7
Memory CD4 T-cell Th2 nTPM: 289.4
Samples: 4
Max nTPM: 292.9
Min nTPM: 282.3
RHH5305_R3671
292.6
RHH5213_R3584
289.7
RHH5241_R3613
292.9
RHH5270_R3642
282.3
Naive CD4 T-cell nTPM: 267.4
Samples: 4
Max nTPM: 280.5
Min nTPM: 239.9
RHH5306_R3672
271.9
RHH5214_R3585
239.9
RHH5242_R3614
277.2
RHH5271_R3643
280.5
Naive CD8 T-cell nTPM: 323.6
Samples: 4
Max nTPM: 358.0
Min nTPM: 302.9
RHH5201_R3572
320.2
RHH5229_R3601
358.0
RHH5258_R3630
313.2
RHH5287_R3659
302.9
Non-Vd2 gdTCR nTPM: 528.0
Samples: 4
Max nTPM: 567.8
Min nTPM: 484.8
RHH5235_R3607
548.3
RHH5264_R3636
484.8
RHH5207_R3578
567.8
RHH5299_R3665
510.9
T-reg nTPM: 252.8
Samples: 4
Max nTPM: 277.0
Min nTPM: 235.6
RHH5301_R3667
246.4
RHH5237_R3609
252.1
RHH5266_R3638
277.0
RHH5209_R3580
235.6
Terminal effector memory CD4 T-cell nTPM: 436.6
Samples: 2
Max nTPM: 504.3
Min nTPM: 368.9
RHH5243_R3615
504.3
RHH5272_R3644
368.9
Terminal effector memory CD8 T-cell nTPM: 488.4
Samples: 4
Max nTPM: 560.1
Min nTPM: 442.3
RHH5232_R3604
481.9
RHH5204_R3575
442.3
RHH5261_R3633
560.1
RHH5296_R3662
469.1
Vd2 gdTCR nTPM: 376.7
Samples: 4
Max nTPM: 420.8
Min nTPM: 322.3
RHH5234_R3606
350.1
RHH5206_R3577
420.8
RHH5263_R3635
413.5
RHH5298_R3664
322.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.