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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
180.1
nTPM
Monaco:
101.4
nTPM
Schmiedel:
249.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
180.1
HPA sample
nTPM
gdT-cell nTPM: 96.3
Samples: 6
Max nTPM: 121.4
Min nTPM: 73.8
P10809_1007
76.8
P10809_1022
73.8
P10809_1041
93.3
P10809_1060
103.2
P10809_1077
121.4
P10809_1098
109.4
MAIT T-cell nTPM: 108.4
Samples: 6
Max nTPM: 140.2
Min nTPM: 82.7
P10809_1006
82.7
P10809_1024
107.9
P10809_1043
83.3
P10809_1062
122.4
P10809_1083
113.6
P10809_1097
140.2
Memory CD4 T-cell nTPM: 123.3
Samples: 6
Max nTPM: 144.7
Min nTPM: 99.5
P10809_1014
111.3
P10809_1026
114.4
P10809_1045
99.5
P10809_1064
131.7
P10809_1086
144.7
P10809_1113
138.3
Memory CD8 T-cell nTPM: 117.8
Samples: 5
Max nTPM: 141.8
Min nTPM: 95.1
P10809_1012
103.8
P10809_1027
107.8
P10809_1046
95.1
P10809_1065
140.3
P10809_1111
141.8
Naive CD4 T-cell nTPM: 118.4
Samples: 6
Max nTPM: 130.9
Min nTPM: 105.0
P10809_1015
123.5
P10809_1030
105.0
P10809_1049
111.4
P10809_1068
130.9
P10809_1085
122.0
P10809_1112
117.6
Naive CD8 T-cell nTPM: 130.4
Samples: 6
Max nTPM: 143.9
Min nTPM: 119.3
P10809_1016
119.3
P10809_1031
142.5
P10809_1050
125.6
P10809_1069
128.2
P10809_1087
143.9
P10809_1110
122.9
T-reg nTPM: 180.2
Samples: 6
Max nTPM: 214.3
Min nTPM: 147.9
P10809_1018
147.9
P10809_1037
173.6
P10809_1056
150.0
P10809_1075
214.3
P10809_1094
204.3
P10809_1106
190.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
101.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 63.3
Samples: 4
Max nTPM: 68.8
Min nTPM: 51.6
RHH5202_R3573
67.4
RHH5230_R3602
51.6
RHH5259_R3631
65.5
RHH5288_R3660
68.8
Effector memory CD8 T-cell nTPM: 55.0
Samples: 4
Max nTPM: 63.1
Min nTPM: 43.6
RHH5203_R3574
62.7
RHH5231_R3603
63.1
RHH5260_R3632
50.6
RHH5289_R3661
43.6
MAIT T-cell nTPM: 64.3
Samples: 4
Max nTPM: 84.0
Min nTPM: 49.8
RHH5233_R3605
64.8
RHH5205_R3576
58.4
RHH5262_R3634
49.8
RHH5297_R3663
84.0
Memory CD4 T-cell TFH nTPM: 60.3
Samples: 4
Max nTPM: 68.5
Min nTPM: 50.8
RHH5300_R3666
50.8
RHH5236_R3608
68.5
RHH5265_R3637
55.1
RHH5208_R3579
66.6
Memory CD4 T-cell Th1 nTPM: 72.4
Samples: 4
Max nTPM: 98.5
Min nTPM: 45.2
RHH5210_R3581
45.2
RHH5302_R3668
98.5
RHH5238_R3610
84.8
RHH5267_R3639
60.9
Memory CD4 T-cell Th1/Th17 nTPM: 71.9
Samples: 4
Max nTPM: 87.3
Min nTPM: 53.3
RHH5303_R3669
87.3
RHH5211_R3582
77.4
RHH5239_R3611
53.3
RHH5268_R3640
69.5
Memory CD4 T-cell Th17 nTPM: 51.7
Samples: 4
Max nTPM: 65.2
Min nTPM: 43.4
RHH5304_R3670
65.2
RHH5212_R3583
43.4
RHH5240_R3612
50.4
RHH5269_R3641
47.7
Memory CD4 T-cell Th2 nTPM: 62.8
Samples: 4
Max nTPM: 67.8
Min nTPM: 55.7
RHH5305_R3671
67.8
RHH5213_R3584
63.0
RHH5241_R3613
64.6
RHH5270_R3642
55.7
Naive CD4 T-cell nTPM: 62.6
Samples: 4
Max nTPM: 88.7
Min nTPM: 40.8
RHH5306_R3672
62.0
RHH5214_R3585
88.7
RHH5242_R3614
40.8
RHH5271_R3643
58.9
Naive CD8 T-cell nTPM: 52.1
Samples: 4
Max nTPM: 71.5
Min nTPM: 39.2
RHH5201_R3572
44.5
RHH5229_R3601
53.2
RHH5258_R3630
39.2
RHH5287_R3659
71.5
Non-Vd2 gdTCR nTPM: 62.7
Samples: 4
Max nTPM: 66.8
Min nTPM: 57.8
RHH5235_R3607
66.8
RHH5264_R3636
60.1
RHH5207_R3578
57.8
RHH5299_R3665
66.0
T-reg nTPM: 77.3
Samples: 4
Max nTPM: 93.0
Min nTPM: 60.8
RHH5301_R3667
93.0
RHH5237_R3609
71.4
RHH5266_R3638
60.8
RHH5209_R3580
83.9
Terminal effector memory CD4 T-cell nTPM: 56.3
Samples: 2
Max nTPM: 62.2
Min nTPM: 50.3
RHH5243_R3615
50.3
RHH5272_R3644
62.2
Terminal effector memory CD8 T-cell nTPM: 94.5
Samples: 4
Max nTPM: 202.2
Min nTPM: 46.5
RHH5232_R3604
46.5
RHH5204_R3575
202.2
RHH5261_R3633
73.7
RHH5296_R3662
55.5
Vd2 gdTCR nTPM: 101.4
Samples: 4
Max nTPM: 193.2
Min nTPM: 59.7
RHH5234_R3606
59.7
RHH5206_R3577
193.2
RHH5263_R3635
62.0
RHH5298_R3664
90.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
