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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
206.1
nTPM
Monaco:
501.6
nTPM
Schmiedel:
1169.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
206.1
HPA sample
nTPM
gdT-cell nTPM: 122.0
Samples: 6
Max nTPM: 178.9
Min nTPM: 100.0
P10809_1007
100.8
P10809_1022
178.9
P10809_1041
128.1
P10809_1060
114.1
P10809_1077
100.0
P10809_1098
110.0
MAIT T-cell nTPM: 122.7
Samples: 6
Max nTPM: 156.1
Min nTPM: 92.6
P10809_1006
131.0
P10809_1024
156.1
P10809_1043
114.1
P10809_1062
122.2
P10809_1083
92.6
P10809_1097
120.1
Memory CD4 T-cell nTPM: 128.2
Samples: 6
Max nTPM: 149.7
Min nTPM: 101.0
P10809_1014
137.6
P10809_1026
133.6
P10809_1045
149.7
P10809_1064
112.4
P10809_1086
101.0
P10809_1113
135.0
Memory CD8 T-cell nTPM: 115.7
Samples: 5
Max nTPM: 129.4
Min nTPM: 104.0
P10809_1012
129.4
P10809_1027
104.0
P10809_1046
119.2
P10809_1065
120.2
P10809_1111
105.6
Naive CD4 T-cell nTPM: 206.1
Samples: 6
Max nTPM: 240.2
Min nTPM: 174.0
P10809_1015
240.2
P10809_1030
198.1
P10809_1049
217.3
P10809_1068
208.2
P10809_1085
174.0
P10809_1112
198.7
Naive CD8 T-cell nTPM: 161.5
Samples: 6
Max nTPM: 204.4
Min nTPM: 105.8
P10809_1016
204.4
P10809_1031
155.0
P10809_1050
161.7
P10809_1069
160.6
P10809_1087
105.8
P10809_1110
181.4
T-reg nTPM: 136.8
Samples: 6
Max nTPM: 165.0
Min nTPM: 112.8
P10809_1018
126.4
P10809_1037
138.1
P10809_1056
112.8
P10809_1075
131.6
P10809_1094
147.0
P10809_1106
165.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
501.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 420.0
Samples: 4
Max nTPM: 579.1
Min nTPM: 346.2
RHH5202_R3573
579.1
RHH5230_R3602
356.5
RHH5259_R3631
346.2
RHH5288_R3660
398.1
Effector memory CD8 T-cell nTPM: 320.7
Samples: 4
Max nTPM: 485.9
Min nTPM: 229.9
RHH5203_R3574
485.9
RHH5231_R3603
229.9
RHH5260_R3632
237.7
RHH5289_R3661
329.1
MAIT T-cell nTPM: 367.1
Samples: 4
Max nTPM: 438.4
Min nTPM: 321.1
RHH5233_R3605
355.8
RHH5205_R3576
438.4
RHH5262_R3634
353.0
RHH5297_R3663
321.1
Memory CD4 T-cell TFH nTPM: 417.0
Samples: 4
Max nTPM: 616.8
Min nTPM: 254.4
RHH5300_R3666
365.0
RHH5236_R3608
254.4
RHH5265_R3637
431.9
RHH5208_R3579
616.8
Memory CD4 T-cell Th1 nTPM: 403.6
Samples: 4
Max nTPM: 581.5
Min nTPM: 297.2
RHH5210_R3581
581.5
RHH5302_R3668
384.5
RHH5238_R3610
297.2
RHH5267_R3639
351.3
Memory CD4 T-cell Th1/Th17 nTPM: 366.2
Samples: 4
Max nTPM: 454.6
Min nTPM: 302.8
RHH5303_R3669
362.8
RHH5211_R3582
454.6
RHH5239_R3611
302.8
RHH5268_R3640
344.6
Memory CD4 T-cell Th17 nTPM: 363.1
Samples: 4
Max nTPM: 422.2
Min nTPM: 292.7
RHH5304_R3670
389.2
RHH5212_R3583
422.2
RHH5240_R3612
292.7
RHH5269_R3641
348.4
Memory CD4 T-cell Th2 nTPM: 393.3
Samples: 4
Max nTPM: 466.5
Min nTPM: 342.6
RHH5305_R3671
387.4
RHH5213_R3584
466.5
RHH5241_R3613
342.6
RHH5270_R3642
376.6
Naive CD4 T-cell nTPM: 493.4
Samples: 4
Max nTPM: 510.7
Min nTPM: 458.3
RHH5306_R3672
494.5
RHH5214_R3585
509.9
RHH5242_R3614
458.3
RHH5271_R3643
510.7
Naive CD8 T-cell nTPM: 501.6
Samples: 4
Max nTPM: 715.4
Min nTPM: 263.0
RHH5201_R3572
715.4
RHH5229_R3601
263.0
RHH5258_R3630
487.3
RHH5287_R3659
540.6
Non-Vd2 gdTCR nTPM: 322.8
Samples: 4
Max nTPM: 463.6
Min nTPM: 265.9
RHH5235_R3607
265.9
RHH5264_R3636
276.8
RHH5207_R3578
463.6
RHH5299_R3665
284.8
T-reg nTPM: 383.3
Samples: 4
Max nTPM: 499.6
Min nTPM: 280.6
RHH5301_R3667
368.7
RHH5237_R3609
280.6
RHH5266_R3638
384.4
RHH5209_R3580
499.6
Terminal effector memory CD4 T-cell nTPM: 326.9
Samples: 2
Max nTPM: 390.6
Min nTPM: 263.1
RHH5243_R3615
263.1
RHH5272_R3644
390.6
Terminal effector memory CD8 T-cell nTPM: 294.8
Samples: 4
Max nTPM: 331.2
Min nTPM: 238.8
RHH5232_R3604
295.4
RHH5204_R3575
331.2
RHH5261_R3633
238.8
RHH5296_R3662
313.6
Vd2 gdTCR nTPM: 362.3
Samples: 4
Max nTPM: 434.1
Min nTPM: 300.6
RHH5234_R3606
385.7
RHH5206_R3577
434.1
RHH5263_R3635
328.6
RHH5298_R3664
300.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.