HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:14.2 nTPM
HPA Brain:37.0 nTPM
GTEx:14.2 nTPM
FANTOM5:20.0 Scaled Tags Per Million
Pig:11.9 nTPM
Mouse:22.5 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035836
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 37.0
Sample id Sample description nTPM
Hippocampus
nTPM: 34.4
2148 Female, age 91, left hemisphere 37.9
1911 Female, age 85, right hemisphere 35.6
1855 Male, age 76, left hemisphere 35.0
2621 Female, age 67, right hemisphere 34.0
2529 Female, age 94, left hemisphere 33.7
1898 Male, age 80, left hemisphere 30.2
Dentate gyrus
nTPM: 35.2
2531 Female, age 67, both hemispheres 39.9
2246 Female, age 85, both hemispheres 38.7
1927 Female, age 91, both hemispheres 36.1
2528 Male, age 74, both hemispheres 32.5
2010 Male, age 76, both hemispheres 32.3
2530 Female, age 94, left hemisphere 31.7
Entorhinal gyrus
nTPM: 34.6
2613 Female, age 94, left hemisphere 37.2
2764 Male, age 80, right hemisphere 36.1
1787 Male, age 76, left hemisphere 35.3
2686 Male, age 75, right hemisphere 33.6
2117 Female, age 91, right hemisphere 33.0
1938 Female, age 85, left hemisphere 32.4
Hippocampus, CA1
nTPM: 34.8
2082 Female, age 91, right hemisphere 35.6
2045 Male, age 76, both hemispheres 35.5
1873 Female, age 85, both hemispheres 34.8
2749 Male, age 80, left hemisphere 34.5
2527 Male, age 74, both hemispheres 33.3
Hippocampus, CA2
nTPM: 33.5
2113 Female, age 91, right hemisphere 37.9
1940 Female, age 85, left hemisphere 36.1
2437 Female, age 94, left hemisphere 34.3
2249 Male, age 74, both hemispheres 33.6
1892 Male, age 76, both hemispheres 30.0
1963 Male, age 80, left hemisphere 29.3
Hippocampus, CA3
nTPM: 37.0
2620 Female, age 94, left hemisphere 44.1
1891 Female, age 85, both hemispheres 39.7
2137 Male, age 80, left hemisphere 36.7
2436 Male, age 74, both hemispheres 34.3
2861 Female, age 67, both hemispheres 34.2
1867 Male, age 76, both hemispheres 33.2
Parahippocampal cortex
nTPM: 35.1
2693 Female, age 94, both hemispheres 40.3
2692 Male, age 74, both hemispheres 38.2
2622 Female, age 67, right hemisphere 38.0
2532 Female, age 72, left hemisphere 36.8
1990 Female, age 91, right hemisphere 35.1
1850 Male, age 80, both hemispheres 33.6
2018 Male, age 76, both hemispheres 33.5
2250 Female, age 67, right hemisphere 32.5
2245 Female, age 91, both hemispheres 31.5
1933 Female, age 85, both hemispheres 31.1
Perirhinal gyrus
nTPM: 33.5
2848 Male, age 76, right hemisphere 35.3
1794 Male, age 80, right hemisphere 34.3
2521 Female, age 94, right hemisphere 33.9
1847 Female, age 91, left hemisphere 32.8
1841 Female, age 85, right hemisphere 31.3
Subiculum
nTPM: 36.3
2042 Male, age 76, both hemispheres 40.0
2438 Female, age 94, left hemisphere 38.1
2729 Female, age 91, right hemisphere 37.5
1977 Female, age 85, both hemispheres 34.4
2619 Male, age 74, both hemispheres 33.9
1901 Male, age 80, both hemispheres 33.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.2
Samples: 197

Max nTPM: 23.7
Min nTPM: 8.5
Std nTPM: 2.7
Median nTPM: 13.9
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 23.7
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 22.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 21.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 21.4
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 21.2
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 20.5
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 20.1
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 20.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 20.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 19.3
GTEX-1EKGG-0011-R1b-SM-9QEI1 60-69 years, male 19.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.0
FF:10169-103B7 60 years, female 23.8
FF:10153-102I9 76 years, female 16.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.9
Pig sample Sample description nTPM
Subiculum
nTPM: 10.3
Samples: 4

Max nTPM: 12.2
Min nTPM: 9.0
Sample A Female 12.2
Sample B Female 10.0
Sample C Male 9.9
Sample D Male 9.0
Dorsal hippocampus
nTPM: 11.9
Samples: 4

Max nTPM: 13.6
Min nTPM: 10.0
Sample A Female 13.6
Sample B Female 11.9
Sample C Male 12.0
Sample D Male 10.0
Entorhinal cortex
nTPM: 9.6
Samples: 4

Max nTPM: 10.7
Min nTPM: 8.2
Sample A Female 10.7
Sample B Female 9.8
Sample C Male 9.6
Sample D Male 8.2
Ventral hippocampus
nTPM: 11.4
Samples: 4

Max nTPM: 13.2
Min nTPM: 8.8
Sample A Female 10.5
Sample B Female 8.8
Sample C Male 13.0
Sample D Male 13.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 22.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.0
Samples: 4

Max nTPM: 23.1
Min nTPM: 19.6
Sample A Male 19.6
Sample B Male 19.6
Sample C Female 21.7
Sample D Female 23.1
Hippocampal formation
nTPM: 22.5
Samples: 4

Max nTPM: 24.0
Min nTPM: 21.0
Sample A Male 21.3
Sample B Male 23.8
Sample C Female 24.0
Sample D Female 21.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
68444732 Antisense, RP_050111_02_D07, Mouse strain C57BL/6J (56 days, male) 0.5

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