HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:33.0 nTPM
HPA Brain:32.4 nTPM
GTEx:33.0 nTPM
FANTOM5:55.4 Scaled Tags Per Million
Pig:29.4 nTPM
Mouse:116.5 nTPM
Allen mouse:11.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002114
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.4
Sample id Sample description nTPM
Hippocampus
nTPM: 28.6
1898 Male, age 80, left hemisphere 39.2
1855 Male, age 76, left hemisphere 29.8
2529 Female, age 94, left hemisphere 27.7
2148 Female, age 91, left hemisphere 26.0
1911 Female, age 85, right hemisphere 24.8
2621 Female, age 67, right hemisphere 24.2
Dentate gyrus
nTPM: 28.1
2010 Male, age 76, both hemispheres 34.5
1927 Female, age 91, both hemispheres 32.6
2530 Female, age 94, left hemisphere 29.1
2528 Male, age 74, both hemispheres 26.8
2246 Female, age 85, both hemispheres 25.4
2531 Female, age 67, both hemispheres 20.2
Entorhinal gyrus
nTPM: 26.7
1938 Female, age 85, left hemisphere 33.6
2764 Male, age 80, right hemisphere 29.8
2117 Female, age 91, right hemisphere 28.3
1787 Male, age 76, left hemisphere 27.6
2686 Male, age 75, right hemisphere 23.1
2613 Female, age 94, left hemisphere 18.2
Hippocampus, CA1
nTPM: 32.0
2749 Male, age 80, left hemisphere 44.2
1873 Female, age 85, both hemispheres 32.9
2045 Male, age 76, both hemispheres 29.4
2527 Male, age 74, both hemispheres 28.9
2082 Female, age 91, right hemisphere 24.7
Hippocampus, CA2
nTPM: 32.4
1892 Male, age 76, both hemispheres 40.5
1963 Male, age 80, left hemisphere 37.5
2249 Male, age 74, both hemispheres 34.7
1940 Female, age 85, left hemisphere 27.3
2113 Female, age 91, right hemisphere 27.3
2437 Female, age 94, left hemisphere 26.9
Hippocampus, CA3
nTPM: 27.5
1867 Male, age 76, both hemispheres 35.7
2137 Male, age 80, left hemisphere 35.6
2436 Male, age 74, both hemispheres 30.0
1891 Female, age 85, both hemispheres 27.6
2620 Female, age 94, left hemisphere 18.3
2861 Female, age 67, both hemispheres 17.6
Parahippocampal cortex
nTPM: 26.5
1850 Male, age 80, both hemispheres 36.8
1990 Female, age 91, right hemisphere 29.7
1933 Female, age 85, both hemispheres 29.4
2018 Male, age 76, both hemispheres 29.1
2250 Female, age 67, right hemisphere 27.8
2245 Female, age 91, both hemispheres 25.8
2693 Female, age 94, both hemispheres 24.8
2532 Female, age 72, left hemisphere 22.9
2692 Male, age 74, both hemispheres 20.0
2622 Female, age 67, right hemisphere 18.3
Perirhinal gyrus
nTPM: 31.6
1847 Female, age 91, left hemisphere 37.2
1841 Female, age 85, right hemisphere 33.8
1794 Male, age 80, right hemisphere 33.3
2848 Male, age 76, right hemisphere 27.9
2521 Female, age 94, right hemisphere 25.8
Subiculum
nTPM: 26.5
1901 Male, age 80, both hemispheres 30.9
1977 Female, age 85, both hemispheres 30.1
2042 Male, age 76, both hemispheres 28.9
2729 Female, age 91, right hemisphere 25.1
2619 Male, age 74, both hemispheres 22.9
2438 Female, age 94, left hemisphere 21.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.0
Samples: 197

Max nTPM: 77.6
Min nTPM: 19.7
Std nTPM: 7.0
Median nTPM: 32.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 77.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 58.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 52.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 47.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 46.9
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 46.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 46.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 46.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 45.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 45.4
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 45.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 55.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 55.4
FF:10169-103B7 60 years, female 68.5
FF:10153-102I9 76 years, female 42.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 29.4
Pig sample Sample description nTPM
Subiculum
nTPM: 25.5
Samples: 4

Max nTPM: 28.5
Min nTPM: 23.8
Sample A Female 28.5
Sample B Female 23.8
Sample C Male 24.5
Sample D Male 25.3
Dorsal hippocampus
nTPM: 29.5
Samples: 4

Max nTPM: 35.8
Min nTPM: 25.4
Sample A Female 35.8
Sample B Female 29.8
Sample C Male 26.8
Sample D Male 25.4
Entorhinal cortex
nTPM: 25.5
Samples: 4

Max nTPM: 32.0
Min nTPM: 21.3
Sample A Female 24.3
Sample B Female 32.0
Sample C Male 24.5
Sample D Male 21.3
Ventral hippocampus
nTPM: 24.6
Samples: 4

Max nTPM: 27.5
Min nTPM: 21.1
Sample A Female 27.5
Sample B Female 21.1
Sample C Male 23.0
Sample D Male 26.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 116.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 106.2
Samples: 4

Max nTPM: 113.6
Min nTPM: 97.1
Sample A Male 100.7
Sample B Male 113.3
Sample C Female 113.6
Sample D Female 97.1
Hippocampal formation
nTPM: 116.5
Samples: 4

Max nTPM: 139.8
Min nTPM: 107.3
Sample A Male 139.8
Sample B Male 109.4
Sample C Female 109.3
Sample D Female 107.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.1
69080012 Antisense, RP_050324_01_D01, Mouse strain C57BL/6J (56 days, male) 11.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org