HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:1157.4 nTPM
HPA Brain:472.9 nTPM
GTEx:1157.4 nTPM
FANTOM5:79.4 Scaled Tags Per Million
Mouse:1779.2 nTPM
Allen mouse:9.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA054510Antibody HPA057793
Glial cells LowNot detected
Neuronal cells MediumLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 472.9
Sample id Sample description nTPM
Hippocampus
nTPM: 464.9
2529 Female, age 94, left hemisphere 550.7
1898 Male, age 80, left hemisphere 499.5
2621 Female, age 67, right hemisphere 490.8
2148 Female, age 91, left hemisphere 423.8
1855 Male, age 76, left hemisphere 416.3
1911 Female, age 85, right hemisphere 408.3
Dentate gyrus
nTPM: 465.1
2530 Female, age 94, left hemisphere 599.9
2010 Male, age 76, both hemispheres 495.9
2531 Female, age 67, both hemispheres 486.8
2246 Female, age 85, both hemispheres 450.4
1927 Female, age 91, both hemispheres 384.9
2528 Male, age 74, both hemispheres 372.6
Entorhinal gyrus
nTPM: 472.9
2117 Female, age 91, right hemisphere 530.2
2686 Male, age 75, right hemisphere 526.9
2764 Male, age 80, right hemisphere 514.6
1787 Male, age 76, left hemisphere 460.3
1938 Female, age 85, left hemisphere 443.4
2613 Female, age 94, left hemisphere 361.8
Hippocampus, CA1
nTPM: 431.3
2082 Female, age 91, right hemisphere 473.9
2749 Male, age 80, left hemisphere 454.0
2045 Male, age 76, both hemispheres 415.7
2527 Male, age 74, both hemispheres 412.3
1873 Female, age 85, both hemispheres 400.4
Hippocampus, CA2
nTPM: 429.5
1963 Male, age 80, left hemisphere 493.1
2437 Female, age 94, left hemisphere 448.0
2113 Female, age 91, right hemisphere 426.2
1940 Female, age 85, left hemisphere 423.6
1892 Male, age 76, both hemispheres 395.2
2249 Male, age 74, both hemispheres 390.7
Hippocampus, CA3
nTPM: 402.1
2861 Female, age 67, both hemispheres 474.8
1891 Female, age 85, both hemispheres 408.0
1867 Male, age 76, both hemispheres 407.9
2620 Female, age 94, left hemisphere 395.3
2137 Male, age 80, left hemisphere 368.8
2436 Male, age 74, both hemispheres 357.9
Parahippocampal cortex
nTPM: 416.9
2018 Male, age 76, both hemispheres 494.1
2532 Female, age 72, left hemisphere 473.9
2245 Female, age 91, both hemispheres 469.4
1990 Female, age 91, right hemisphere 438.7
2622 Female, age 67, right hemisphere 420.2
1850 Male, age 80, both hemispheres 408.6
1933 Female, age 85, both hemispheres 402.7
2692 Male, age 74, both hemispheres 390.2
2250 Female, age 67, right hemisphere 389.7
2693 Female, age 94, both hemispheres 281.3
Perirhinal gyrus
nTPM: 426.3
1794 Male, age 80, right hemisphere 493.6
1847 Female, age 91, left hemisphere 450.0
1841 Female, age 85, right hemisphere 426.8
2521 Female, age 94, right hemisphere 382.7
2848 Male, age 76, right hemisphere 378.4
Subiculum
nTPM: 457.3
2438 Female, age 94, left hemisphere 497.7
1977 Female, age 85, both hemispheres 494.8
2042 Male, age 76, both hemispheres 475.1
2619 Male, age 74, both hemispheres 448.0
1901 Male, age 80, both hemispheres 425.2
2729 Female, age 91, right hemisphere 402.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 1157.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1157.4
Samples: 197

Max nTPM: 2937.4
Min nTPM: 511.5
Std nTPM: 399.3
Median nTPM: 1082.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2937.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 2632.8
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 2465.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 2386.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 2281.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 2232.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 2213.4
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 2079.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 2078.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 1958.0
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 1877.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 79.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 79.4
FF:10169-103B7 60 years, female 121.5
FF:10153-102I9 76 years, female 37.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1779.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1779.2
Samples: 4

Max nTPM: 1891.2
Min nTPM: 1711.3
Sample A Male 1802.0
Sample B Male 1712.2
Sample C Female 1891.2
Sample D Female 1711.3
Hippocampal formation
nTPM: 1727.2
Samples: 4

Max nTPM: 1930.6
Min nTPM: 1558.7
Sample A Male 1930.6
Sample B Male 1558.7
Sample C Female 1608.9
Sample D Female 1810.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.5
68321982 Antisense, RP_041207_01_B08, Mouse strain C57BL/6J (56 days, male) 10.2
75774687 Antisense, RP_060530_01_D12, Mouse strain C57BL/6J (56 days, male) 8.8

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