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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
4354.0
nTPM
Monaco:
741.7
nTPM
Schmiedel:
611.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
4354.0
HPA sample
nTPM
gdT-cell nTPM: 2375.1
Samples: 6
Max nTPM: 3159.0
Min nTPM: 1797.0
P10809_1007
2554.4
P10809_1022
2495.5
P10809_1041
3159.0
P10809_1060
1797.0
P10809_1077
2104.3
P10809_1098
2140.6
MAIT T-cell nTPM: 3287.4
Samples: 6
Max nTPM: 4147.3
Min nTPM: 2672.1
P10809_1006
2712.6
P10809_1024
3263.8
P10809_1043
3352.5
P10809_1062
3576.2
P10809_1083
2672.1
P10809_1097
4147.3
Memory CD4 T-cell nTPM: 3627.9
Samples: 6
Max nTPM: 4593.6
Min nTPM: 2675.8
P10809_1014
3802.6
P10809_1026
4593.6
P10809_1045
3741.4
P10809_1064
3256.8
P10809_1086
2675.8
P10809_1113
3697.2
Memory CD8 T-cell nTPM: 2989.7
Samples: 5
Max nTPM: 3264.9
Min nTPM: 2775.7
P10809_1012
3036.8
P10809_1027
3067.6
P10809_1046
3264.9
P10809_1065
2775.7
P10809_1111
2803.6
Naive CD4 T-cell nTPM: 4354.0
Samples: 6
Max nTPM: 5863.4
Min nTPM: 3178.1
P10809_1015
4093.7
P10809_1030
4673.9
P10809_1049
5863.4
P10809_1068
4450.2
P10809_1085
3178.1
P10809_1112
3864.6
Naive CD8 T-cell nTPM: 3624.6
Samples: 6
Max nTPM: 5274.5
Min nTPM: 2177.1
P10809_1016
5274.5
P10809_1031
3803.9
P10809_1050
3412.4
P10809_1069
3671.9
P10809_1087
2177.1
P10809_1110
3408.0
T-reg nTPM: 3674.4
Samples: 6
Max nTPM: 4723.7
Min nTPM: 3169.2
P10809_1018
3169.2
P10809_1037
3243.9
P10809_1056
4723.7
P10809_1075
3800.0
P10809_1094
3758.0
P10809_1106
3351.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
741.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 521.2
Samples: 4
Max nTPM: 777.4
Min nTPM: 211.1
RHH5202_R3573
211.1
RHH5230_R3602
677.9
RHH5259_R3631
777.4
RHH5288_R3660
418.5
Effector memory CD8 T-cell nTPM: 285.2
Samples: 4
Max nTPM: 478.4
Min nTPM: 201.3
RHH5203_R3574
219.2
RHH5231_R3603
241.7
RHH5260_R3632
478.4
RHH5289_R3661
201.3
MAIT T-cell nTPM: 426.8
Samples: 4
Max nTPM: 533.5
Min nTPM: 246.8
RHH5233_R3605
246.8
RHH5205_R3576
533.5
RHH5262_R3634
531.1
RHH5297_R3663
395.9
Memory CD4 T-cell TFH nTPM: 377.7
Samples: 4
Max nTPM: 612.9
Min nTPM: 206.1
RHH5300_R3666
375.1
RHH5236_R3608
612.9
RHH5265_R3637
316.6
RHH5208_R3579
206.1
Memory CD4 T-cell Th1 nTPM: 672.2
Samples: 4
Max nTPM: 1215.4
Min nTPM: 232.1
RHH5210_R3581
232.1
RHH5302_R3668
546.1
RHH5238_R3610
1215.4
RHH5267_R3639
695.0
Memory CD4 T-cell Th1/Th17 nTPM: 563.4
Samples: 4
Max nTPM: 783.9
Min nTPM: 340.7
RHH5303_R3669
445.6
RHH5211_R3582
340.7
RHH5239_R3611
683.5
RHH5268_R3640
783.9
Memory CD4 T-cell Th17 nTPM: 564.5
Samples: 4
Max nTPM: 805.7
Min nTPM: 333.0
RHH5304_R3670
805.7
RHH5212_R3583
333.0
RHH5240_R3612
630.3
RHH5269_R3641
488.9
Memory CD4 T-cell Th2 nTPM: 555.1
Samples: 4
Max nTPM: 925.5
Min nTPM: 349.8
RHH5305_R3671
925.5
RHH5213_R3584
431.9
RHH5241_R3613
349.8
RHH5270_R3642
513.1
Naive CD4 T-cell nTPM: 741.7
Samples: 4
Max nTPM: 949.5
Min nTPM: 472.2
RHH5306_R3672
949.5
RHH5214_R3585
891.8
RHH5242_R3614
472.2
RHH5271_R3643
653.1
Naive CD8 T-cell nTPM: 665.8
Samples: 4
Max nTPM: 1034.1
Min nTPM: 296.8
RHH5201_R3572
296.8
RHH5229_R3601
1034.1
RHH5258_R3630
379.1
RHH5287_R3659
953.0
Non-Vd2 gdTCR nTPM: 321.8
Samples: 4
Max nTPM: 506.2
Min nTPM: 229.4
RHH5235_R3607
506.2
RHH5264_R3636
240.6
RHH5207_R3578
229.4
RHH5299_R3665
311.0
T-reg nTPM: 522.8
Samples: 4
Max nTPM: 623.2
Min nTPM: 358.4
RHH5301_R3667
550.5
RHH5237_R3609
358.4
RHH5266_R3638
623.2
RHH5209_R3580
559.0
Terminal effector memory CD4 T-cell nTPM: 335.5
Samples: 2
Max nTPM: 426.9
Min nTPM: 244.0
RHH5243_R3615
426.9
RHH5272_R3644
244.0
Terminal effector memory CD8 T-cell nTPM: 385.2
Samples: 4
Max nTPM: 556.1
Min nTPM: 160.9
RHH5232_R3604
160.9
RHH5204_R3575
553.6
RHH5261_R3633
556.1
RHH5296_R3662
270.3
Vd2 gdTCR nTPM: 596.4
Samples: 4
Max nTPM: 948.1
Min nTPM: 334.7
RHH5234_R3606
334.7
RHH5206_R3577
948.1
RHH5263_R3635
589.1
RHH5298_R3664
513.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.