HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:78.8 nTPM
HPA Brain:117.9 nTPM
GTEx:78.8 nTPM
FANTOM5:82.6 Scaled Tags Per Million
Pig:100.2 nTPM
Mouse:157.0 nTPM
Allen mouse:15.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034994
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 117.9
Sample id Sample description nTPM
Hippocampus
nTPM: 103.2
1898 Male, age 80, left hemisphere 129.5
1855 Male, age 76, left hemisphere 114.7
1911 Female, age 85, right hemisphere 111.8
2621 Female, age 67, right hemisphere 100.2
2529 Female, age 94, left hemisphere 83.8
2148 Female, age 91, left hemisphere 79.1
Dentate gyrus
nTPM: 109.4
2010 Male, age 76, both hemispheres 135.3
2530 Female, age 94, left hemisphere 120.8
1927 Female, age 91, both hemispheres 112.3
2528 Male, age 74, both hemispheres 104.6
2246 Female, age 85, both hemispheres 103.7
2531 Female, age 67, both hemispheres 79.6
Entorhinal gyrus
nTPM: 103.7
2764 Male, age 80, right hemisphere 117.1
2117 Female, age 91, right hemisphere 115.1
1938 Female, age 85, left hemisphere 113.5
1787 Male, age 76, left hemisphere 109.8
2613 Female, age 94, left hemisphere 101.0
2686 Male, age 75, right hemisphere 65.6
Hippocampus, CA1
nTPM: 116.6
2749 Male, age 80, left hemisphere 160.6
1873 Female, age 85, both hemispheres 135.1
2045 Male, age 76, both hemispheres 116.2
2082 Female, age 91, right hemisphere 89.3
2527 Male, age 74, both hemispheres 81.9
Hippocampus, CA2
nTPM: 117.9
1892 Male, age 76, both hemispheres 159.3
1963 Male, age 80, left hemisphere 158.2
2249 Male, age 74, both hemispheres 112.1
2437 Female, age 94, left hemisphere 97.8
2113 Female, age 91, right hemisphere 90.4
1940 Female, age 85, left hemisphere 89.5
Hippocampus, CA3
nTPM: 100.5
1867 Male, age 76, both hemispheres 142.9
1891 Female, age 85, both hemispheres 132.2
2137 Male, age 80, left hemisphere 106.3
2620 Female, age 94, left hemisphere 98.8
2436 Male, age 74, both hemispheres 77.8
2861 Female, age 67, both hemispheres 45.2
Parahippocampal cortex
nTPM: 93.1
1850 Male, age 80, both hemispheres 121.2
1990 Female, age 91, right hemisphere 112.6
2018 Male, age 76, both hemispheres 104.8
1933 Female, age 85, both hemispheres 103.5
2693 Female, age 94, both hemispheres 97.9
2532 Female, age 72, left hemisphere 96.0
2245 Female, age 91, both hemispheres 88.3
2692 Male, age 74, both hemispheres 82.5
2250 Female, age 67, right hemisphere 80.4
2622 Female, age 67, right hemisphere 43.4
Perirhinal gyrus
nTPM: 110.0
1847 Female, age 91, left hemisphere 119.4
1794 Male, age 80, right hemisphere 111.8
1841 Female, age 85, right hemisphere 107.6
2521 Female, age 94, right hemisphere 107.4
2848 Male, age 76, right hemisphere 103.8
Subiculum
nTPM: 111.3
1977 Female, age 85, both hemispheres 133.9
1901 Male, age 80, both hemispheres 133.1
2042 Male, age 76, both hemispheres 126.2
2438 Female, age 94, left hemisphere 102.8
2619 Male, age 74, both hemispheres 87.3
2729 Female, age 91, right hemisphere 84.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 78.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 78.8
Samples: 197

Max nTPM: 191.9
Min nTPM: 12.5
Std nTPM: 29.6
Median nTPM: 75.8
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 191.9
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 169.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 160.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 155.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 152.6
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 148.2
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 142.3
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 133.2
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 132.2
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 131.2
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 130.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 82.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 82.6
FF:10169-103B7 60 years, female 84.1
FF:10153-102I9 76 years, female 81.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 100.2
Pig sample Sample description nTPM
Subiculum
nTPM: 97.1
Samples: 4

Max nTPM: 115.0
Min nTPM: 90.0
Sample A Female 115.0
Sample B Female 91.4
Sample C Male 91.8
Sample D Male 90.0
Dorsal hippocampus
nTPM: 100.2
Samples: 4

Max nTPM: 118.1
Min nTPM: 79.4
Sample A Female 118.1
Sample B Female 103.9
Sample C Male 99.3
Sample D Male 79.4
Entorhinal cortex
nTPM: 98.4
Samples: 4

Max nTPM: 112.0
Min nTPM: 89.1
Sample A Female 97.6
Sample B Female 112.0
Sample C Male 95.0
Sample D Male 89.1
Ventral hippocampus
nTPM: 84.7
Samples: 4

Max nTPM: 97.8
Min nTPM: 70.7
Sample A Female 97.8
Sample B Female 70.7
Sample C Male 82.7
Sample D Male 87.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 157.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 149.8
Samples: 4

Max nTPM: 155.6
Min nTPM: 140.6
Sample A Male 140.6
Sample B Male 155.6
Sample C Female 149.7
Sample D Female 153.3
Hippocampal formation
nTPM: 157.0
Samples: 4

Max nTPM: 178.5
Min nTPM: 149.4
Sample A Male 178.5
Sample B Male 150.7
Sample C Female 149.4
Sample D Female 149.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.1
74881159 Antisense, RP_060220_01_A08, Mouse strain C57BL/6J (56 days, male) 16.0
2366 Antisense, RP_Baylor_102826, Mouse strain C57BL/6J (56 days, male) 14.2

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