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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
314.6
nTPM
FANTOM5:
353.7
Scaled Tags Per Million
Pig:
62.5
nTPM
Allen mouse:
0.3
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
314.6
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 268.7
2188
Female, age 91, both hemispheres
342.0
2301
Female, age 85, both hemispheres
340.2
2090
Male, age 80, both hemispheres
248.4
1984
Male, age 76, both hemispheres
144.2
Dorsal cochlear nucleus nTPM: 230.4
2187
Female, age 91, both hemispheres
260.9
2370
Male, age 61, both hemispheres
233.8
2378
Male, age 80, both hemispheres
231.2
2802
Male, age 74, right hemisphere
227.9
2058
Male, age 76, both hemispheres
197.9
Dorsal tegmental nucleus nTPM: 235.7
2083
Male, age 80, both hemispheres
333.0
1936
Male, age 76, left hemisphere
227.1
2326
Male, age 74, both hemispheres
211.5
2358
Male, age 61, both hemispheres
171.2
Dorsolateral tegmental area nTPM: 241.2
2654
Male, age 80, both hemispheres
308.5
2751
Female, age 85, both hemispheres
293.6
2337
Male, age 61, both hemispheres
291.0
2141
Male, age 76, both hemispheres
161.6
2360
Male, age 74, both hemispheres
151.4
Kolliker-Fuse nucleus nTPM: 284.2
2793
Female, age 91, left hemisphere
395.9
2163
Male, age 80, both hemispheres
245.9
2315
Male, age 76, right hemisphere
210.9
Lateral lemniscal nuclei nTPM: 278.9
2320
Female, age 91, left hemisphere
352.2
2036
Male, age 80, both hemispheres
305.8
2746
Female, age 85, left hemisphere
283.5
2453
Male, age 74, right hemisphere
237.4
2169
Male, age 76, both hemispheres
215.7
Lateral parabrachial nucleus nTPM: 289.6
2792
Male, age 76, both hemispheres
421.8
2013
Male, age 80, both hemispheres
307.5
2139
Female, age 85, right hemisphere
226.0
2790
Male, age 61, both hemispheres
203.1
Lateral vestibular nucleus nTPM: 233.4
2311
Male, age 80, both hemispheres
241.8
2184
Male, age 76, both hemispheres
225.1
Locus coeruleus nTPM: 140.6
2162
Male, age 80, both hemispheres
173.6
2317
Female, age 72, unknown
173.0
2720
Male, age 74, both hemispheres
146.1
2123
Female, age 91, both hemispheres
129.3
1980
Male, age 76, both hemispheres
129.2
2014
Male, age 55, unknown
120.8
2788
Male, age 74, unknown
111.9
Medial parabrachial nucleus nTPM: 242.7
2854
Male, age 80, both hemispheres
274.8
2170
Female, age 91, both hemispheres
271.9
2463
Female, age 85, right hemisphere
250.5
2786
Male, age 76, both hemispheres
240.5
2156
Male, age 61, both hemispheres
175.6
Medial periolivary nuclei nTPM: 244.9
2081
Male, age 80, both hemispheres
342.5
2458
Female, age 91, both hemispheres
284.2
2791
Male, age 74, right hemisphere
227.0
2063
Male, age 76, both hemispheres
187.9
2171
Female, age 85, both hemispheres
183.1
Motor facial nucleus nTPM: 267.2
2697
Female, age 85, both hemispheres
339.2
2126
Male, age 61, both hemispheres
306.3
2327
Male, age 80, both hemispheres
283.7
2795
Female, age 91, both hemispheres
247.3
2365
Male, age 74, right hemisphere
240.1
2062
Male, age 76, both hemispheres
186.9
Motor trigeminal nucleus nTPM: 269.2
2079
Male, age 80, both hemispheres
291.7
2321
Female, age 91, both hemispheres
289.7
2560
Male, age 74, both hemispheres
289.1
2309
Male, age 76, both hemispheres
261.4
2335
Male, age 61, both hemispheres
214.2
Nuclei of the trapezoid body nTPM: 244.2
2166
Male, age 80, both hemispheres
300.3
2368
Female, age 91, both hemispheres
277.3
2159
Male, age 61, both hemispheres
264.0
1983
Male, age 76, both hemispheres
210.5
2735
Female, age 85, both hemispheres
168.8
Nucleus raphe magnus nTPM: 250.8
2459
Female, age 91, both hemispheres
355.3
2328
Male, age 80, both hemispheres
316.0
2051
Male, age 76, both hemispheres
289.8
2455
Male, age 74, both hemispheres
197.4
2160
Male, age 61, both hemispheres
174.1
2172
Female, age 85, both hemispheres
172.5
Paramedian reticular nucleus nTPM: 227.7
2050
Female, age 85, both hemispheres
269.5
2057
Male, age 80, both hemispheres
231.1
2052
Male, age 76, both hemispheres
209.8
2313
Male, age 61, both hemispheres
200.3
Pedunculopontine tegmental nucleus nTPM: 224.4
2334
Male, age 80, both hemispheres
259.0
2338
Male, age 61, both hemispheres
234.2
1921
Female, age 85, both hemispheres
179.9
Pontine nuclei nTPM: 314.6
2454
Male, age 74, left hemisphere
392.7
2319
Female, age 91, both hemispheres
348.2
2115
Male, age 80, left hemisphere
332.9
2787
Female, age 85, both hemispheres
305.5
2109
Female, age 72, unknown
292.9
1863
Male, age 55, unknown
289.1
1968
Male, age 76, left hemisphere
282.8
2727
Male, age 61, right hemisphere
272.8
Pontine raphe nucleus nTPM: 228.9
2122
Female, age 85, midline
238.8
2853
Male, age 76, midline
219.0
Posteroventral cochlear nucleus nTPM: 271.6
2135
Female, age 91, both hemispheres
385.9
2341
Male, age 80, both hemispheres
323.8
2070
Male, age 76, both hemispheres
224.4
2371
Male, age 61, both hemispheres
224.3
2752
Female, age 85, both hemispheres
199.3
Principal sensory trigeminal nucleus nTPM: 238.7
2367
Female, age 91, left hemisphere
341.2
2324
Male, age 76, both hemispheres
224.6
2008
Male, age 80, left hemisphere
223.2
2158
Male, age 61, both hemispheres
165.9
Reticular pontine nucleus, caudal nTPM: 309.7
2457
Female, age 91, both hemispheres
358.1
2332
Male, age 80, right hemisphere
334.4
2092
Male, age 76, both hemispheres
273.9
2559
Male, age 74, both hemispheres
272.2
Reticular pontine nucleus, oral nTPM: 307.5
2366
Female, age 91, both hemispheres
401.3
1939
Male, age 80, both hemispheres
314.2
2361
Male, age 74, both hemispheres
293.8
2012
Female, age 85, both hemispheres
266.6
2167
Male, age 76, both hemispheres
261.8
Reticulotegmental nucleus nTPM: 256.1
2333
Male, age 80, both hemispheres
315.9
2322
Female, age 91, both hemispheres
278.3
2452
Male, age 74, both hemispheres
250.3
2325
Male, age 76, both hemispheres
180.0
Spinal trigeminal nucleus, oral nTPM: 223.6
2164
Male, age 80, both hemispheres
259.6
1978
Male, age 76, both hemispheres
208.2
2737
Female, age 85, both hemispheres
203.1
Subcoeruleus area nTPM: 230.8
2369
Female, age 85, left hemisphere
338.2
1958
Male, age 80, both hemispheres
241.8
2089
Male, age 76, left hemisphere
224.3
2323
Female, age 91, left hemisphere
179.8
2451
Male, age 74, both hemispheres
170.1
Superior olive nTPM: 280.1
2329
Male, age 80, right hemisphere
333.0
2020
Male, age 76, both hemispheres
295.1
2561
Female, age 91, both hemispheres
270.5
1875
Female, age 85, both hemispheres
258.6
2364
Male, age 74, right hemisphere
243.6
Ventral periolivary nuclei nTPM: 228.0
2023
Male, age 76, both hemispheres
305.5
2165
Male, age 80, both hemispheres
239.9
2794
Female, age 91, left hemisphere
196.4
2130
Female, age 85, both hemispheres
170.2
Ventrolateral tegmental area, A5 NE cell group nTPM: 270.1
2456
Female, age 91, both hemispheres
324.4
2840
Female, age 85, both hemispheres
319.2
2161
Male, age 80, both hemispheres
308.3
1959
Male, age 76, both hemispheres
240.9
2449
Male, age 74, both hemispheres
227.0
2359
Male, age 61, both hemispheres
200.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
62.5
Pig sample
Sample description
nTPM
Pons nTPM: 62.5
Samples: 4
Max nTPM: 78.3
Min nTPM: 44.4
Sample A
Female
44.4
Sample B
Female
71.6
Sample C
Male
55.7
Sample D
Male
78.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
