HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:41.6 nTPM
HPA Brain:187.6 nTPM
GTEx:41.6 nTPM
FANTOM5:231.8 Scaled Tags Per Million
Pig:44.1 nTPM
Mouse:26.1 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049331Antibody HPA056959
Glial cells Not detectedNot detected
Neuronal cells LowNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 187.6
Sample id Sample description nTPM
Hippocampus
nTPM: 140.2
1911 Female, age 85, right hemisphere 168.9
2529 Female, age 94, left hemisphere 148.7
1855 Male, age 76, left hemisphere 148.4
2621 Female, age 67, right hemisphere 136.9
1898 Male, age 80, left hemisphere 119.5
2148 Female, age 91, left hemisphere 118.8
Dentate gyrus
nTPM: 136.1
2530 Female, age 94, left hemisphere 205.6
2528 Male, age 74, both hemispheres 156.4
2010 Male, age 76, both hemispheres 155.7
2246 Female, age 85, both hemispheres 131.3
2531 Female, age 67, both hemispheres 89.6
1927 Female, age 91, both hemispheres 78.3
Entorhinal gyrus
nTPM: 137.3
2117 Female, age 91, right hemisphere 189.3
2764 Male, age 80, right hemisphere 168.5
1787 Male, age 76, left hemisphere 136.3
1938 Female, age 85, left hemisphere 124.3
2686 Male, age 75, right hemisphere 103.8
2613 Female, age 94, left hemisphere 101.5
Hippocampus, CA1
nTPM: 117.4
2527 Male, age 74, both hemispheres 155.2
2082 Female, age 91, right hemisphere 144.2
1873 Female, age 85, both hemispheres 115.2
2045 Male, age 76, both hemispheres 92.7
2749 Male, age 80, left hemisphere 79.7
Hippocampus, CA2
nTPM: 131.0
2249 Male, age 74, both hemispheres 193.2
2113 Female, age 91, right hemisphere 140.9
1940 Female, age 85, left hemisphere 135.6
1963 Male, age 80, left hemisphere 121.6
2437 Female, age 94, left hemisphere 118.2
1892 Male, age 76, both hemispheres 76.7
Hippocampus, CA3
nTPM: 101.3
1891 Female, age 85, both hemispheres 182.8
2436 Male, age 74, both hemispheres 110.4
2620 Female, age 94, left hemisphere 93.1
1867 Male, age 76, both hemispheres 89.2
2861 Female, age 67, both hemispheres 75.2
2137 Male, age 80, left hemisphere 57.5
Parahippocampal cortex
nTPM: 125.8
2692 Male, age 74, both hemispheres 178.0
2532 Female, age 72, left hemisphere 157.9
1990 Female, age 91, right hemisphere 154.3
2018 Male, age 76, both hemispheres 151.4
2245 Female, age 91, both hemispheres 124.2
1933 Female, age 85, both hemispheres 110.9
1850 Male, age 80, both hemispheres 104.6
2622 Female, age 67, right hemisphere 96.9
2250 Female, age 67, right hemisphere 94.0
2693 Female, age 94, both hemispheres 85.8
Perirhinal gyrus
nTPM: 81.7
2848 Male, age 76, right hemisphere 102.1
2521 Female, age 94, right hemisphere 86.5
1794 Male, age 80, right hemisphere 76.5
1847 Female, age 91, left hemisphere 74.7
1841 Female, age 85, right hemisphere 68.7
Subiculum
nTPM: 187.6
2042 Male, age 76, both hemispheres 285.4
1901 Male, age 80, both hemispheres 215.3
1977 Female, age 85, both hemispheres 178.4
2619 Male, age 74, both hemispheres 173.4
2438 Female, age 94, left hemisphere 141.8
2729 Female, age 91, right hemisphere 131.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 41.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 41.6
Samples: 197

Max nTPM: 202.2
Min nTPM: 4.8
Std nTPM: 27.4
Median nTPM: 35.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 202.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 133.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 131.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 129.6
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 121.9
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 117.5
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 116.9
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 102.4
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 93.5
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 91.6
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 91.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 231.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 231.8
FF:10153-102I9 76 years, female 341.0
FF:10169-103B7 60 years, female 122.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 44.1
Pig sample Sample description nTPM
Subiculum
nTPM: 21.6
Samples: 4

Max nTPM: 30.4
Min nTPM: 16.8
Sample A Female 20.2
Sample B Female 30.4
Sample C Male 16.8
Sample D Male 18.9
Dorsal hippocampus
nTPM: 44.1
Samples: 4

Max nTPM: 63.1
Min nTPM: 9.2
Sample A Female 57.7
Sample B Female 46.5
Sample C Male 63.1
Sample D Male 9.2
Entorhinal cortex
nTPM: 17.4
Samples: 4

Max nTPM: 28.4
Min nTPM: 11.7
Sample A Female 15.6
Sample B Female 28.4
Sample C Male 13.9
Sample D Male 11.7
Ventral hippocampus
nTPM: 27.5
Samples: 4

Max nTPM: 30.2
Min nTPM: 21.4
Sample A Female 28.3
Sample B Female 21.4
Sample C Male 29.9
Sample D Male 30.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 26.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.3
Samples: 4

Max nTPM: 23.1
Min nTPM: 11.5
Sample A Male 23.1
Sample B Male 16.2
Sample C Female 14.4
Sample D Female 11.5
Hippocampal formation
nTPM: 26.1
Samples: 4

Max nTPM: 33.7
Min nTPM: 21.5
Sample A Male 21.5
Sample B Male 24.1
Sample C Female 33.7
Sample D Female 25.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
638709 Antisense, RP_040831_02_C07, Mouse strain C57BL/6J (56 days, male) 0.0

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