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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
113.2
nTPM
Monaco:
186.4
nTPM
Schmiedel:
526.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
113.2
HPA sample
nTPM
gdT-cell nTPM: 83.4
Samples: 6
Max nTPM: 107.3
Min nTPM: 70.3
P10809_1007
75.5
P10809_1022
107.3
P10809_1041
85.6
P10809_1060
74.4
P10809_1077
70.3
P10809_1098
87.0
MAIT T-cell nTPM: 107.1
Samples: 6
Max nTPM: 132.8
Min nTPM: 91.9
P10809_1006
114.9
P10809_1024
132.8
P10809_1043
99.0
P10809_1062
98.8
P10809_1083
91.9
P10809_1097
105.0
Memory CD4 T-cell nTPM: 87.3
Samples: 6
Max nTPM: 97.3
Min nTPM: 73.3
P10809_1014
91.8
P10809_1026
73.3
P10809_1045
94.0
P10809_1064
79.3
P10809_1086
88.1
P10809_1113
97.3
Memory CD8 T-cell nTPM: 100.8
Samples: 5
Max nTPM: 117.6
Min nTPM: 85.3
P10809_1012
103.6
P10809_1027
117.6
P10809_1046
100.3
P10809_1065
85.3
P10809_1111
97.1
Naive CD4 T-cell nTPM: 113.2
Samples: 6
Max nTPM: 121.0
Min nTPM: 102.2
P10809_1015
110.7
P10809_1030
120.3
P10809_1049
121.0
P10809_1068
102.2
P10809_1085
116.4
P10809_1112
108.5
Naive CD8 T-cell nTPM: 112.6
Samples: 6
Max nTPM: 160.9
Min nTPM: 92.1
P10809_1016
115.1
P10809_1031
160.9
P10809_1050
104.1
P10809_1069
92.6
P10809_1087
92.1
P10809_1110
110.7
T-reg nTPM: 101.0
Samples: 6
Max nTPM: 117.6
Min nTPM: 85.8
P10809_1018
93.4
P10809_1037
109.4
P10809_1056
110.3
P10809_1075
85.8
P10809_1094
89.4
P10809_1106
117.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
186.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 143.2
Samples: 4
Max nTPM: 156.6
Min nTPM: 131.5
RHH5202_R3573
152.3
RHH5230_R3602
156.6
RHH5259_R3631
131.5
RHH5288_R3660
132.2
Effector memory CD8 T-cell nTPM: 155.9
Samples: 4
Max nTPM: 179.0
Min nTPM: 111.1
RHH5203_R3574
179.0
RHH5231_R3603
111.1
RHH5260_R3632
158.9
RHH5289_R3661
174.5
MAIT T-cell nTPM: 166.8
Samples: 4
Max nTPM: 195.0
Min nTPM: 136.0
RHH5233_R3605
171.3
RHH5205_R3576
195.0
RHH5262_R3634
165.0
RHH5297_R3663
136.0
Memory CD4 T-cell TFH nTPM: 154.4
Samples: 4
Max nTPM: 182.4
Min nTPM: 134.7
RHH5300_R3666
134.8
RHH5236_R3608
134.7
RHH5265_R3637
182.4
RHH5208_R3579
165.5
Memory CD4 T-cell Th1 nTPM: 153.7
Samples: 4
Max nTPM: 172.1
Min nTPM: 138.2
RHH5210_R3581
172.1
RHH5302_R3668
138.2
RHH5238_R3610
147.4
RHH5267_R3639
157.0
Memory CD4 T-cell Th1/Th17 nTPM: 157.0
Samples: 4
Max nTPM: 172.9
Min nTPM: 149.5
RHH5303_R3669
149.5
RHH5211_R3582
172.9
RHH5239_R3611
151.8
RHH5268_R3640
153.7
Memory CD4 T-cell Th17 nTPM: 183.6
Samples: 4
Max nTPM: 192.4
Min nTPM: 175.3
RHH5304_R3670
178.9
RHH5212_R3583
175.3
RHH5240_R3612
187.9
RHH5269_R3641
192.4
Memory CD4 T-cell Th2 nTPM: 180.6
Samples: 4
Max nTPM: 201.7
Min nTPM: 161.5
RHH5305_R3671
169.2
RHH5213_R3584
161.5
RHH5241_R3613
201.7
RHH5270_R3642
189.9
Naive CD4 T-cell nTPM: 179.7
Samples: 4
Max nTPM: 219.6
Min nTPM: 140.2
RHH5306_R3672
186.1
RHH5214_R3585
140.2
RHH5242_R3614
172.8
RHH5271_R3643
219.6
Naive CD8 T-cell nTPM: 186.4
Samples: 4
Max nTPM: 214.9
Min nTPM: 146.6
RHH5201_R3572
194.4
RHH5229_R3601
146.6
RHH5258_R3630
214.9
RHH5287_R3659
189.6
Non-Vd2 gdTCR nTPM: 132.1
Samples: 4
Max nTPM: 142.3
Min nTPM: 116.3
RHH5235_R3607
131.6
RHH5264_R3636
138.1
RHH5207_R3578
142.3
RHH5299_R3665
116.3
T-reg nTPM: 146.8
Samples: 4
Max nTPM: 173.5
Min nTPM: 117.7
RHH5301_R3667
151.6
RHH5237_R3609
144.3
RHH5266_R3638
173.5
RHH5209_R3580
117.7
Terminal effector memory CD4 T-cell nTPM: 147.9
Samples: 2
Max nTPM: 160.1
Min nTPM: 135.7
RHH5243_R3615
135.7
RHH5272_R3644
160.1
Terminal effector memory CD8 T-cell nTPM: 137.9
Samples: 4
Max nTPM: 162.4
Min nTPM: 120.9
RHH5232_R3604
134.2
RHH5204_R3575
134.0
RHH5261_R3633
162.4
RHH5296_R3662
120.9
Vd2 gdTCR nTPM: 146.6
Samples: 4
Max nTPM: 174.9
Min nTPM: 117.4
RHH5234_R3606
164.4
RHH5206_R3577
129.7
RHH5263_R3635
174.9
RHH5298_R3664
117.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
