HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:11.6 nTPM
HPA Brain:13.6 nTPM
GTEx:11.6 nTPM
FANTOM5:37.1 Scaled Tags Per Million
Pig:16.7 nTPM
Mouse:45.3 nTPM
Allen mouse:11.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031844Antibody HPA031845Antibody HPA031846
Glial cells LowNot detectedNot detected
Neuronal cells MediumNot detectedMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.6
Sample id Sample description nTPM
Hippocampus
nTPM: 11.9
1898 Male, age 80, left hemisphere 14.5
1855 Male, age 76, left hemisphere 12.9
1911 Female, age 85, right hemisphere 11.7
2148 Female, age 91, left hemisphere 11.3
2529 Female, age 94, left hemisphere 10.6
2621 Female, age 67, right hemisphere 10.4
Dentate gyrus
nTPM: 11.8
1927 Female, age 91, both hemispheres 14.2
2010 Male, age 76, both hemispheres 14.2
2528 Male, age 74, both hemispheres 11.7
2246 Female, age 85, both hemispheres 10.9
2530 Female, age 94, left hemisphere 10.9
2531 Female, age 67, both hemispheres 8.9
Entorhinal gyrus
nTPM: 10.4
1938 Female, age 85, left hemisphere 12.1
1787 Male, age 76, left hemisphere 10.4
2613 Female, age 94, left hemisphere 10.3
2686 Male, age 75, right hemisphere 10.3
2764 Male, age 80, right hemisphere 9.8
2117 Female, age 91, right hemisphere 9.7
Hippocampus, CA1
nTPM: 13.6
2749 Male, age 80, left hemisphere 18.5
1873 Female, age 85, both hemispheres 15.6
2527 Male, age 74, both hemispheres 12.8
2082 Female, age 91, right hemisphere 11.0
2045 Male, age 76, both hemispheres 10.1
Hippocampus, CA2
nTPM: 13.5
1892 Male, age 76, both hemispheres 17.5
1963 Male, age 80, left hemisphere 14.9
2249 Male, age 74, both hemispheres 13.2
1940 Female, age 85, left hemisphere 12.9
2437 Female, age 94, left hemisphere 12.4
2113 Female, age 91, right hemisphere 10.2
Hippocampus, CA3
nTPM: 12.2
2137 Male, age 80, left hemisphere 15.2
1867 Male, age 76, both hemispheres 14.9
2861 Female, age 67, both hemispheres 12.0
1891 Female, age 85, both hemispheres 11.8
2436 Male, age 74, both hemispheres 10.5
2620 Female, age 94, left hemisphere 8.8
Parahippocampal cortex
nTPM: 11.0
1850 Male, age 80, both hemispheres 13.0
2693 Female, age 94, both hemispheres 12.4
2245 Female, age 91, both hemispheres 12.3
1933 Female, age 85, both hemispheres 12.2
1990 Female, age 91, right hemisphere 11.8
2018 Male, age 76, both hemispheres 10.7
2250 Female, age 67, right hemisphere 10.1
2692 Male, age 74, both hemispheres 9.9
2622 Female, age 67, right hemisphere 8.9
2532 Female, age 72, left hemisphere 8.4
Perirhinal gyrus
nTPM: 11.4
1841 Female, age 85, right hemisphere 12.8
1794 Male, age 80, right hemisphere 12.2
1847 Female, age 91, left hemisphere 10.9
2521 Female, age 94, right hemisphere 10.7
2848 Male, age 76, right hemisphere 10.2
Subiculum
nTPM: 11.0
2042 Male, age 76, both hemispheres 13.1
1901 Male, age 80, both hemispheres 12.9
1977 Female, age 85, both hemispheres 11.7
2729 Female, age 91, right hemisphere 10.5
2619 Male, age 74, both hemispheres 8.9
2438 Female, age 94, left hemisphere 8.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.6
Samples: 197

Max nTPM: 24.1
Min nTPM: 6.3
Std nTPM: 2.9
Median nTPM: 11.4
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 24.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 22.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 21.0
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 19.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 18.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 18.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 18.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 18.2
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 18.1
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 17.1
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 16.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.1
FF:10169-103B7 60 years, female 43.6
FF:10153-102I9 76 years, female 30.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.7
Pig sample Sample description nTPM
Subiculum
nTPM: 15.3
Samples: 4

Max nTPM: 16.9
Min nTPM: 12.3
Sample A Female 12.3
Sample B Female 16.9
Sample C Male 15.2
Sample D Male 16.6
Dorsal hippocampus
nTPM: 16.6
Samples: 4

Max nTPM: 18.8
Min nTPM: 14.8
Sample A Female 14.8
Sample B Female 17.7
Sample C Male 15.2
Sample D Male 18.8
Entorhinal cortex
nTPM: 15.6
Samples: 4

Max nTPM: 18.0
Min nTPM: 14.5
Sample A Female 14.8
Sample B Female 15.2
Sample C Male 14.5
Sample D Male 18.0
Ventral hippocampus
nTPM: 15.3
Samples: 4

Max nTPM: 18.2
Min nTPM: 12.4
Sample A Female 15.9
Sample B Female 18.2
Sample C Male 12.4
Sample D Male 14.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 45.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 42.3
Samples: 4

Max nTPM: 46.3
Min nTPM: 37.2
Sample A Male 37.2
Sample B Male 44.5
Sample C Female 46.3
Sample D Female 41.0
Hippocampal formation
nTPM: 45.3
Samples: 4

Max nTPM: 50.8
Min nTPM: 41.6
Sample A Male 50.8
Sample B Male 41.6
Sample C Female 45.9
Sample D Female 42.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.2
68546416 Antisense, RP_050120_02_D12, Mouse strain C57BL/6J (56 days, male) 11.2

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