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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
91.5
nTPM
Monaco:
77.6
nTPM
Schmiedel:
24.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
91.5
HPA sample
nTPM
gdT-cell nTPM: 56.8
Samples: 6
Max nTPM: 71.0
Min nTPM: 36.3
P10809_1007
36.3
P10809_1022
56.6
P10809_1041
52.8
P10809_1060
57.7
P10809_1077
71.0
P10809_1098
66.6
MAIT T-cell nTPM: 70.3
Samples: 6
Max nTPM: 94.8
Min nTPM: 44.5
P10809_1006
44.5
P10809_1024
92.8
P10809_1043
51.1
P10809_1062
62.9
P10809_1083
75.8
P10809_1097
94.8
Memory CD4 T-cell nTPM: 66.8
Samples: 6
Max nTPM: 80.6
Min nTPM: 47.6
P10809_1014
47.6
P10809_1026
58.3
P10809_1045
69.7
P10809_1064
74.6
P10809_1086
80.6
P10809_1113
69.9
Memory CD8 T-cell nTPM: 64.4
Samples: 5
Max nTPM: 87.7
Min nTPM: 48.7
P10809_1012
48.7
P10809_1027
65.7
P10809_1046
61.7
P10809_1065
58.1
P10809_1111
87.7
Naive CD4 T-cell nTPM: 62.1
Samples: 6
Max nTPM: 76.3
Min nTPM: 46.1
P10809_1015
46.1
P10809_1030
52.3
P10809_1049
76.3
P10809_1068
57.3
P10809_1085
76.3
P10809_1112
64.3
Naive CD8 T-cell nTPM: 62.6
Samples: 6
Max nTPM: 84.2
Min nTPM: 43.1
P10809_1016
43.1
P10809_1031
53.7
P10809_1050
65.7
P10809_1069
62.7
P10809_1087
84.2
P10809_1110
66.4
T-reg nTPM: 91.5
Samples: 6
Max nTPM: 117.6
Min nTPM: 57.5
P10809_1018
57.5
P10809_1037
107.0
P10809_1056
80.4
P10809_1075
93.3
P10809_1094
93.0
P10809_1106
117.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
77.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 49.0
Samples: 4
Max nTPM: 66.4
Min nTPM: 31.4
RHH5202_R3573
66.4
RHH5230_R3602
31.4
RHH5259_R3631
38.9
RHH5288_R3660
59.3
Effector memory CD8 T-cell nTPM: 77.6
Samples: 4
Max nTPM: 102.5
Min nTPM: 56.8
RHH5203_R3574
102.5
RHH5231_R3603
65.8
RHH5260_R3632
56.8
RHH5289_R3661
85.3
MAIT T-cell nTPM: 54.2
Samples: 4
Max nTPM: 67.7
Min nTPM: 45.8
RHH5233_R3605
55.5
RHH5205_R3576
45.8
RHH5262_R3634
47.6
RHH5297_R3663
67.7
Memory CD4 T-cell TFH nTPM: 65.4
Samples: 4
Max nTPM: 83.8
Min nTPM: 50.8
RHH5300_R3666
50.8
RHH5236_R3608
56.0
RHH5265_R3637
70.9
RHH5208_R3579
83.8
Memory CD4 T-cell Th1 nTPM: 51.0
Samples: 4
Max nTPM: 58.1
Min nTPM: 34.0
RHH5210_R3581
53.6
RHH5302_R3668
58.1
RHH5238_R3610
34.0
RHH5267_R3639
58.1
Memory CD4 T-cell Th1/Th17 nTPM: 54.5
Samples: 4
Max nTPM: 72.6
Min nTPM: 35.4
RHH5303_R3669
72.6
RHH5211_R3582
69.0
RHH5239_R3611
35.4
RHH5268_R3640
40.9
Memory CD4 T-cell Th17 nTPM: 48.4
Samples: 4
Max nTPM: 55.7
Min nTPM: 39.9
RHH5304_R3670
55.7
RHH5212_R3583
53.6
RHH5240_R3612
39.9
RHH5269_R3641
44.5
Memory CD4 T-cell Th2 nTPM: 70.0
Samples: 4
Max nTPM: 96.1
Min nTPM: 54.4
RHH5305_R3671
61.8
RHH5213_R3584
96.1
RHH5241_R3613
54.4
RHH5270_R3642
67.8
Naive CD4 T-cell nTPM: 64.7
Samples: 4
Max nTPM: 82.4
Min nTPM: 50.8
RHH5306_R3672
52.1
RHH5214_R3585
82.4
RHH5242_R3614
50.8
RHH5271_R3643
73.5
Naive CD8 T-cell nTPM: 59.9
Samples: 4
Max nTPM: 86.7
Min nTPM: 25.0
RHH5201_R3572
86.7
RHH5229_R3601
25.0
RHH5258_R3630
74.5
RHH5287_R3659
53.5
Non-Vd2 gdTCR nTPM: 55.7
Samples: 4
Max nTPM: 79.7
Min nTPM: 36.9
RHH5235_R3607
39.1
RHH5264_R3636
67.0
RHH5207_R3578
79.7
RHH5299_R3665
36.9
T-reg nTPM: 68.6
Samples: 4
Max nTPM: 114.1
Min nTPM: 50.1
RHH5301_R3667
60.0
RHH5237_R3609
114.1
RHH5266_R3638
50.2
RHH5209_R3580
50.1
Terminal effector memory CD4 T-cell nTPM: 62.2
Samples: 2
Max nTPM: 70.7
Min nTPM: 53.6
RHH5243_R3615
53.6
RHH5272_R3644
70.7
Terminal effector memory CD8 T-cell nTPM: 63.1
Samples: 4
Max nTPM: 77.5
Min nTPM: 50.6
RHH5232_R3604
68.9
RHH5204_R3575
77.5
RHH5261_R3633
55.4
RHH5296_R3662
50.6
Vd2 gdTCR nTPM: 51.2
Samples: 4
Max nTPM: 71.9
Min nTPM: 39.1
RHH5234_R3606
53.0
RHH5206_R3577
71.9
RHH5263_R3635
39.1
RHH5298_R3664
40.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
