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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
7897.0
nTPM
Monaco:
2547.5
nTPM
Schmiedel:
310.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
7897.0
HPA sample
nTPM
gdT-cell nTPM: 7897.0
Samples: 6
Max nTPM: 16853.2
Min nTPM: 2470.4
P10809_1007
2470.4
P10809_1022
6935.0
P10809_1041
16853.2
P10809_1060
6045.0
P10809_1077
8186.7
P10809_1098
6891.8
MAIT T-cell nTPM: 2151.6
Samples: 6
Max nTPM: 4829.7
Min nTPM: 27.3
P10809_1006
27.3
P10809_1024
1006.3
P10809_1043
4829.7
P10809_1062
1634.6
P10809_1083
1304.9
P10809_1097
4106.5
Memory CD4 T-cell nTPM: 840.1
Samples: 6
Max nTPM: 2327.0
Min nTPM: 23.2
P10809_1014
23.2
P10809_1026
124.5
P10809_1045
738.5
P10809_1064
2327.0
P10809_1086
1634.5
P10809_1113
193.1
Memory CD8 T-cell nTPM: 3346.1
Samples: 5
Max nTPM: 5691.4
Min nTPM: 239.9
P10809_1012
239.9
P10809_1027
3680.6
P10809_1046
5691.4
P10809_1065
5515.0
P10809_1111
1603.6
Naive CD4 T-cell nTPM: 232.1
Samples: 6
Max nTPM: 903.7
Min nTPM: 10.3
P10809_1015
13.0
P10809_1030
10.3
P10809_1049
201.7
P10809_1068
237.8
P10809_1085
903.7
P10809_1112
26.0
Naive CD8 T-cell nTPM: 2935.5
Samples: 6
Max nTPM: 5864.0
Min nTPM: 114.7
P10809_1016
114.7
P10809_1031
1843.7
P10809_1050
5512.6
P10809_1069
5864.0
P10809_1087
3423.8
P10809_1110
854.2
T-reg nTPM: 40.4
Samples: 6
Max nTPM: 95.3
Min nTPM: 8.0
P10809_1018
8.0
P10809_1037
13.1
P10809_1056
95.3
P10809_1075
36.9
P10809_1094
27.9
P10809_1106
61.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
2547.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 22.3
Samples: 4
Max nTPM: 33.1
Min nTPM: 0.3
RHH5202_R3573
33.1
RHH5230_R3602
0.3
RHH5259_R3631
33.1
RHH5288_R3660
22.8
Effector memory CD8 T-cell nTPM: 632.3
Samples: 4
Max nTPM: 785.4
Min nTPM: 468.3
RHH5203_R3574
540.4
RHH5231_R3603
468.3
RHH5260_R3632
735.2
RHH5289_R3661
785.4
MAIT T-cell nTPM: 272.6
Samples: 4
Max nTPM: 467.6
Min nTPM: 5.0
RHH5233_R3605
5.0
RHH5205_R3576
230.7
RHH5262_R3634
467.6
RHH5297_R3663
387.1
Memory CD4 T-cell TFH nTPM: 19.7
Samples: 4
Max nTPM: 28.7
Min nTPM: 15.2
RHH5300_R3666
16.0
RHH5236_R3608
19.0
RHH5265_R3637
15.2
RHH5208_R3579
28.7
Memory CD4 T-cell Th1 nTPM: 73.9
Samples: 4
Max nTPM: 106.7
Min nTPM: 24.3
RHH5210_R3581
80.3
RHH5302_R3668
24.3
RHH5238_R3610
84.1
RHH5267_R3639
106.7
Memory CD4 T-cell Th1/Th17 nTPM: 70.2
Samples: 4
Max nTPM: 110.1
Min nTPM: 16.7
RHH5303_R3669
79.4
RHH5211_R3582
110.1
RHH5239_R3611
16.7
RHH5268_R3640
74.4
Memory CD4 T-cell Th17 nTPM: 73.8
Samples: 4
Max nTPM: 171.7
Min nTPM: 18.1
RHH5304_R3670
171.7
RHH5212_R3583
79.6
RHH5240_R3612
18.1
RHH5269_R3641
25.7
Memory CD4 T-cell Th2 nTPM: 18.5
Samples: 4
Max nTPM: 41.6
Min nTPM: 3.5
RHH5305_R3671
14.9
RHH5213_R3584
41.6
RHH5241_R3613
3.5
RHH5270_R3642
14.1
Naive CD4 T-cell nTPM: 35.3
Samples: 4
Max nTPM: 65.9
Min nTPM: 17.7
RHH5306_R3672
17.7
RHH5214_R3585
65.9
RHH5242_R3614
35.7
RHH5271_R3643
21.8
Naive CD8 T-cell nTPM: 2.9
Samples: 4
Max nTPM: 5.0
Min nTPM: 0.1
RHH5201_R3572
0.1
RHH5229_R3601
4.4
RHH5258_R3630
5.0
RHH5287_R3659
1.9
Non-Vd2 gdTCR nTPM: 2288.4
Samples: 4
Max nTPM: 3014.4
Min nTPM: 1376.5
RHH5235_R3607
1376.5
RHH5264_R3636
2190.5
RHH5207_R3578
3014.4
RHH5299_R3665
2572.1
T-reg nTPM: 33.0
Samples: 4
Max nTPM: 46.3
Min nTPM: 18.0
RHH5301_R3667
29.3
RHH5237_R3609
18.0
RHH5266_R3638
38.5
RHH5209_R3580
46.3
Terminal effector memory CD4 T-cell nTPM: 1329.9
Samples: 2
Max nTPM: 1603.1
Min nTPM: 1056.6
RHH5243_R3615
1603.1
RHH5272_R3644
1056.6
Terminal effector memory CD8 T-cell nTPM: 2547.5
Samples: 4
Max nTPM: 4046.1
Min nTPM: 1088.0
RHH5232_R3604
1088.0
RHH5204_R3575
3477.1
RHH5261_R3633
4046.1
RHH5296_R3662
1578.8
Vd2 gdTCR nTPM: 2131.1
Samples: 4
Max nTPM: 6184.6
Min nTPM: 225.9
RHH5234_R3606
225.9
RHH5206_R3577
6184.6
RHH5263_R3635
1181.7
RHH5298_R3664
932.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
