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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
71.5
nTPM
Monaco:
771.7
nTPM
Schmiedel:
958.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
71.5
HPA sample
nTPM
gdT-cell nTPM: 54.7
Samples: 6
Max nTPM: 72.4
Min nTPM: 37.1
P10809_1007
55.8
P10809_1022
69.0
P10809_1041
51.5
P10809_1060
72.4
P10809_1077
42.4
P10809_1098
37.1
MAIT T-cell nTPM: 55.5
Samples: 6
Max nTPM: 74.5
Min nTPM: 40.4
P10809_1006
74.5
P10809_1024
67.0
P10809_1043
46.3
P10809_1062
56.1
P10809_1083
48.6
P10809_1097
40.4
Memory CD4 T-cell nTPM: 46.4
Samples: 6
Max nTPM: 55.3
Min nTPM: 38.2
P10809_1014
55.3
P10809_1026
40.9
P10809_1045
50.6
P10809_1064
38.2
P10809_1086
48.7
P10809_1113
44.4
Memory CD8 T-cell nTPM: 50.9
Samples: 5
Max nTPM: 65.4
Min nTPM: 40.9
P10809_1012
65.4
P10809_1027
51.7
P10809_1046
46.0
P10809_1065
50.5
P10809_1111
40.9
Naive CD4 T-cell nTPM: 48.9
Samples: 6
Max nTPM: 61.3
Min nTPM: 39.8
P10809_1015
53.2
P10809_1030
61.3
P10809_1049
46.1
P10809_1068
49.0
P10809_1085
39.8
P10809_1112
43.7
Naive CD8 T-cell nTPM: 49.4
Samples: 6
Max nTPM: 77.1
Min nTPM: 35.0
P10809_1016
52.9
P10809_1031
77.1
P10809_1050
39.0
P10809_1069
45.2
P10809_1087
47.0
P10809_1110
35.0
T-reg nTPM: 71.5
Samples: 6
Max nTPM: 99.7
Min nTPM: 60.4
P10809_1018
76.8
P10809_1037
99.7
P10809_1056
68.3
P10809_1075
60.8
P10809_1094
60.4
P10809_1106
63.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
771.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 715.4
Samples: 4
Max nTPM: 811.7
Min nTPM: 677.5
RHH5202_R3573
811.7
RHH5230_R3602
685.5
RHH5259_R3631
686.7
RHH5288_R3660
677.5
Effector memory CD8 T-cell nTPM: 701.0
Samples: 4
Max nTPM: 738.1
Min nTPM: 669.9
RHH5203_R3574
686.4
RHH5231_R3603
669.9
RHH5260_R3632
709.5
RHH5289_R3661
738.1
MAIT T-cell nTPM: 588.2
Samples: 4
Max nTPM: 675.4
Min nTPM: 496.1
RHH5233_R3605
650.8
RHH5205_R3576
675.4
RHH5262_R3634
496.1
RHH5297_R3663
530.3
Memory CD4 T-cell TFH nTPM: 698.2
Samples: 4
Max nTPM: 850.7
Min nTPM: 564.7
RHH5300_R3666
584.4
RHH5236_R3608
793.1
RHH5265_R3637
564.7
RHH5208_R3579
850.7
Memory CD4 T-cell Th1 nTPM: 692.4
Samples: 4
Max nTPM: 767.7
Min nTPM: 622.9
RHH5210_R3581
727.1
RHH5302_R3668
651.8
RHH5238_R3610
767.7
RHH5267_R3639
622.9
Memory CD4 T-cell Th1/Th17 nTPM: 708.3
Samples: 4
Max nTPM: 869.9
Min nTPM: 614.4
RHH5303_R3669
704.5
RHH5211_R3582
644.3
RHH5239_R3611
869.9
RHH5268_R3640
614.4
Memory CD4 T-cell Th17 nTPM: 669.3
Samples: 4
Max nTPM: 812.2
Min nTPM: 552.2
RHH5304_R3670
656.1
RHH5212_R3583
552.2
RHH5240_R3612
812.2
RHH5269_R3641
656.8
Memory CD4 T-cell Th2 nTPM: 694.2
Samples: 4
Max nTPM: 833.0
Min nTPM: 605.2
RHH5305_R3671
703.7
RHH5213_R3584
833.0
RHH5241_R3613
605.2
RHH5270_R3642
635.0
Naive CD4 T-cell nTPM: 752.2
Samples: 4
Max nTPM: 786.9
Min nTPM: 662.7
RHH5306_R3672
781.8
RHH5214_R3585
777.4
RHH5242_R3614
662.7
RHH5271_R3643
786.9
Naive CD8 T-cell nTPM: 725.1
Samples: 4
Max nTPM: 987.0
Min nTPM: 528.1
RHH5201_R3572
682.7
RHH5229_R3601
987.0
RHH5258_R3630
528.1
RHH5287_R3659
702.5
Non-Vd2 gdTCR nTPM: 634.9
Samples: 4
Max nTPM: 721.3
Min nTPM: 563.6
RHH5235_R3607
563.6
RHH5264_R3636
669.5
RHH5207_R3578
721.3
RHH5299_R3665
585.0
T-reg nTPM: 771.7
Samples: 4
Max nTPM: 973.7
Min nTPM: 625.1
RHH5301_R3667
625.1
RHH5237_R3609
973.7
RHH5266_R3638
692.1
RHH5209_R3580
795.9
Terminal effector memory CD4 T-cell nTPM: 713.2
Samples: 2
Max nTPM: 725.4
Min nTPM: 700.9
RHH5243_R3615
700.9
RHH5272_R3644
725.4
Terminal effector memory CD8 T-cell nTPM: 658.9
Samples: 4
Max nTPM: 736.7
Min nTPM: 560.4
RHH5232_R3604
736.7
RHH5204_R3575
560.4
RHH5261_R3633
652.1
RHH5296_R3662
686.2
Vd2 gdTCR nTPM: 584.0
Samples: 4
Max nTPM: 686.6
Min nTPM: 535.9
RHH5234_R3606
539.2
RHH5206_R3577
574.3
RHH5263_R3635
686.6
RHH5298_R3664
535.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
