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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
113.8
nTPM
Monaco:
57.0
nTPM
Schmiedel:
50.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
113.8
HPA sample
nTPM
gdT-cell nTPM: 63.1
Samples: 6
Max nTPM: 79.4
Min nTPM: 48.0
P10809_1007
48.0
P10809_1022
79.4
P10809_1041
78.1
P10809_1060
49.8
P10809_1077
58.8
P10809_1098
64.7
MAIT T-cell nTPM: 72.9
Samples: 6
Max nTPM: 99.7
Min nTPM: 42.6
P10809_1006
42.6
P10809_1024
99.7
P10809_1043
76.2
P10809_1062
74.7
P10809_1083
53.0
P10809_1097
91.0
Memory CD4 T-cell nTPM: 95.2
Samples: 6
Max nTPM: 106.6
Min nTPM: 61.4
P10809_1014
61.4
P10809_1026
104.8
P10809_1045
106.0
P10809_1064
92.0
P10809_1086
100.1
P10809_1113
106.6
Memory CD8 T-cell nTPM: 70.3
Samples: 5
Max nTPM: 89.7
Min nTPM: 48.6
P10809_1012
48.6
P10809_1027
76.9
P10809_1046
71.5
P10809_1065
89.7
P10809_1111
65.0
Naive CD4 T-cell nTPM: 97.8
Samples: 6
Max nTPM: 121.9
Min nTPM: 61.0
P10809_1015
61.0
P10809_1030
120.3
P10809_1049
121.9
P10809_1068
87.0
P10809_1085
111.2
P10809_1112
85.6
Naive CD8 T-cell nTPM: 75.6
Samples: 6
Max nTPM: 85.5
Min nTPM: 57.8
P10809_1016
57.8
P10809_1031
85.5
P10809_1050
79.4
P10809_1069
79.2
P10809_1087
75.3
P10809_1110
76.2
T-reg nTPM: 113.9
Samples: 6
Max nTPM: 149.6
Min nTPM: 69.5
P10809_1018
69.5
P10809_1037
101.2
P10809_1056
149.6
P10809_1075
113.0
P10809_1094
127.8
P10809_1106
122.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
57.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 36.2
Samples: 4
Max nTPM: 46.9
Min nTPM: 26.5
RHH5202_R3573
46.9
RHH5230_R3602
26.5
RHH5259_R3631
28.2
RHH5288_R3660
43.2
Effector memory CD8 T-cell nTPM: 46.8
Samples: 4
Max nTPM: 68.3
Min nTPM: 34.8
RHH5203_R3574
68.3
RHH5231_R3603
39.1
RHH5260_R3632
45.0
RHH5289_R3661
34.8
MAIT T-cell nTPM: 36.9
Samples: 4
Max nTPM: 49.0
Min nTPM: 27.4
RHH5233_R3605
39.8
RHH5205_R3576
49.0
RHH5262_R3634
27.4
RHH5297_R3663
31.2
Memory CD4 T-cell TFH nTPM: 55.8
Samples: 4
Max nTPM: 82.9
Min nTPM: 37.3
RHH5300_R3666
49.0
RHH5236_R3608
82.9
RHH5265_R3637
37.3
RHH5208_R3579
54.0
Memory CD4 T-cell Th1 nTPM: 42.7
Samples: 4
Max nTPM: 56.3
Min nTPM: 32.9
RHH5210_R3581
56.3
RHH5302_R3668
44.6
RHH5238_R3610
36.9
RHH5267_R3639
32.9
Memory CD4 T-cell Th1/Th17 nTPM: 51.2
Samples: 4
Max nTPM: 88.6
Min nTPM: 30.1
RHH5303_R3669
54.5
RHH5211_R3582
88.6
RHH5239_R3611
30.1
RHH5268_R3640
31.7
Memory CD4 T-cell Th17 nTPM: 49.9
Samples: 4
Max nTPM: 79.0
Min nTPM: 32.6
RHH5304_R3670
43.6
RHH5212_R3583
79.0
RHH5240_R3612
44.5
RHH5269_R3641
32.6
Memory CD4 T-cell Th2 nTPM: 50.8
Samples: 4
Max nTPM: 69.2
Min nTPM: 33.0
RHH5305_R3671
48.7
RHH5213_R3584
52.2
RHH5241_R3613
69.2
RHH5270_R3642
33.0
Naive CD4 T-cell nTPM: 44.9
Samples: 4
Max nTPM: 69.8
Min nTPM: 24.5
RHH5306_R3672
44.0
RHH5214_R3585
69.8
RHH5242_R3614
41.2
RHH5271_R3643
24.5
Naive CD8 T-cell nTPM: 42.5
Samples: 4
Max nTPM: 61.0
Min nTPM: 25.5
RHH5201_R3572
52.1
RHH5229_R3601
25.5
RHH5258_R3630
61.0
RHH5287_R3659
31.5
Non-Vd2 gdTCR nTPM: 48.3
Samples: 4
Max nTPM: 66.4
Min nTPM: 30.7
RHH5235_R3607
30.7
RHH5264_R3636
54.6
RHH5207_R3578
66.4
RHH5299_R3665
41.5
T-reg nTPM: 42.0
Samples: 4
Max nTPM: 57.3
Min nTPM: 24.5
RHH5301_R3667
44.6
RHH5237_R3609
57.3
RHH5266_R3638
24.5
RHH5209_R3580
41.5
Terminal effector memory CD4 T-cell nTPM: 41.7
Samples: 2
Max nTPM: 60.5
Min nTPM: 22.9
RHH5243_R3615
22.9
RHH5272_R3644
60.5
Terminal effector memory CD8 T-cell nTPM: 47.8
Samples: 4
Max nTPM: 70.0
Min nTPM: 26.7
RHH5232_R3604
44.6
RHH5204_R3575
70.0
RHH5261_R3633
26.7
RHH5296_R3662
50.0
Vd2 gdTCR nTPM: 57.0
Samples: 4
Max nTPM: 95.4
Min nTPM: 31.8
RHH5234_R3606
45.5
RHH5206_R3577
95.4
RHH5263_R3635
31.8
RHH5298_R3664
55.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
