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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
67.5
nTPM
Monaco:
410.8
nTPM
Schmiedel:
156.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
67.5
HPA sample
nTPM
gdT-cell nTPM: 47.8
Samples: 6
Max nTPM: 77.7
Min nTPM: 22.0
P10809_1007
30.5
P10809_1022
77.7
P10809_1041
58.5
P10809_1060
54.6
P10809_1077
22.0
P10809_1098
43.7
MAIT T-cell nTPM: 67.5
Samples: 6
Max nTPM: 84.7
Min nTPM: 54.0
P10809_1006
54.0
P10809_1024
64.5
P10809_1043
84.7
P10809_1062
78.3
P10809_1083
58.9
P10809_1097
64.3
Memory CD4 T-cell nTPM: 6.1
Samples: 6
Max nTPM: 11.3
Min nTPM: 1.6
P10809_1014
2.0
P10809_1026
4.9
P10809_1045
5.8
P10809_1064
11.2
P10809_1086
11.3
P10809_1113
1.6
Memory CD8 T-cell nTPM: 13.0
Samples: 5
Max nTPM: 28.3
Min nTPM: 4.5
P10809_1012
7.7
P10809_1027
4.5
P10809_1046
28.3
P10809_1065
16.3
P10809_1111
8.1
Naive CD4 T-cell nTPM: 0.2
Samples: 6
Max nTPM: 1.1
Min nTPM: 0.0
P10809_1015
0.1
P10809_1030
0.0
P10809_1049
0.0
P10809_1068
0.1
P10809_1085
1.1
P10809_1112
0.0
Naive CD8 T-cell nTPM: 1.6
Samples: 6
Max nTPM: 5.1
Min nTPM: 0.0
P10809_1016
0.4
P10809_1031
0.0
P10809_1050
2.0
P10809_1069
2.0
P10809_1087
5.1
P10809_1110
0.0
T-reg nTPM: 0.5
Samples: 6
Max nTPM: 2.8
Min nTPM: 0.0
P10809_1018
0.0
P10809_1037
0.0
P10809_1056
0.0
P10809_1075
0.0
P10809_1094
2.8
P10809_1106
0.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
410.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 26.2
Samples: 4
Max nTPM: 37.0
Min nTPM: 13.4
RHH5202_R3573
13.4
RHH5230_R3602
37.0
RHH5259_R3631
19.9
RHH5288_R3660
34.5
Effector memory CD8 T-cell nTPM: 50.9
Samples: 4
Max nTPM: 96.0
Min nTPM: 14.8
RHH5203_R3574
96.0
RHH5231_R3603
14.8
RHH5260_R3632
40.3
RHH5289_R3661
52.3
MAIT T-cell nTPM: 396.3
Samples: 4
Max nTPM: 455.7
Min nTPM: 332.2
RHH5233_R3605
332.2
RHH5205_R3576
349.9
RHH5262_R3634
455.7
RHH5297_R3663
447.5
Memory CD4 T-cell TFH nTPM: 7.4
Samples: 4
Max nTPM: 11.2
Min nTPM: 1.6
RHH5300_R3666
11.2
RHH5236_R3608
1.6
RHH5265_R3637
6.3
RHH5208_R3579
10.5
Memory CD4 T-cell Th1 nTPM: 23.8
Samples: 4
Max nTPM: 36.0
Min nTPM: 11.4
RHH5210_R3581
36.0
RHH5302_R3668
11.4
RHH5238_R3610
21.1
RHH5267_R3639
26.5
Memory CD4 T-cell Th1/Th17 nTPM: 76.6
Samples: 4
Max nTPM: 98.5
Min nTPM: 32.0
RHH5303_R3669
97.4
RHH5211_R3582
78.5
RHH5239_R3611
32.0
RHH5268_R3640
98.5
Memory CD4 T-cell Th17 nTPM: 44.8
Samples: 4
Max nTPM: 104.4
Min nTPM: 5.1
RHH5304_R3670
104.4
RHH5212_R3583
19.3
RHH5240_R3612
5.1
RHH5269_R3641
50.2
Memory CD4 T-cell Th2 nTPM: 3.5
Samples: 4
Max nTPM: 4.9
Min nTPM: 1.5
RHH5305_R3671
3.3
RHH5213_R3584
4.9
RHH5241_R3613
1.5
RHH5270_R3642
4.1
Naive CD4 T-cell nTPM: 3.2
Samples: 4
Max nTPM: 5.7
Min nTPM: 0.0
RHH5306_R3672
3.5
RHH5214_R3585
5.7
RHH5242_R3614
3.5
RHH5271_R3643
0.0
Naive CD8 T-cell nTPM: 0.5
Samples: 4
Max nTPM: 1.0
Min nTPM: 0.0
RHH5201_R3572
0.7
RHH5229_R3601
0.2
RHH5258_R3630
1.0
RHH5287_R3659
0.0
Non-Vd2 gdTCR nTPM: 111.7
Samples: 4
Max nTPM: 158.7
Min nTPM: 52.0
RHH5235_R3607
158.7
RHH5264_R3636
99.7
RHH5207_R3578
136.3
RHH5299_R3665
52.0
T-reg nTPM: 7.4
Samples: 4
Max nTPM: 10.8
Min nTPM: 4.4
RHH5301_R3667
6.9
RHH5237_R3609
4.4
RHH5266_R3638
7.5
RHH5209_R3580
10.8
Terminal effector memory CD4 T-cell nTPM: 128.8
Samples: 2
Max nTPM: 157.0
Min nTPM: 100.5
RHH5243_R3615
100.5
RHH5272_R3644
157.0
Terminal effector memory CD8 T-cell nTPM: 56.9
Samples: 4
Max nTPM: 154.3
Min nTPM: 21.6
RHH5232_R3604
21.6
RHH5204_R3575
24.7
RHH5261_R3633
154.3
RHH5296_R3662
26.8
Vd2 gdTCR nTPM: 410.8
Samples: 4
Max nTPM: 558.3
Min nTPM: 321.4
RHH5234_R3606
321.4
RHH5206_R3577
399.2
RHH5263_R3635
558.3
RHH5298_R3664
364.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
