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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
73.4
nTPM
Monaco:
186.9
nTPM
Schmiedel:
152.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
73.4
HPA sample
nTPM
gdT-cell nTPM: 53.4
Samples: 6
Max nTPM: 61.4
Min nTPM: 45.3
P10809_1007
49.5
P10809_1022
61.4
P10809_1041
58.4
P10809_1060
53.4
P10809_1077
52.1
P10809_1098
45.3
MAIT T-cell nTPM: 46.4
Samples: 6
Max nTPM: 52.0
Min nTPM: 38.3
P10809_1006
52.0
P10809_1024
45.8
P10809_1043
50.0
P10809_1062
42.5
P10809_1083
38.3
P10809_1097
49.6
Memory CD4 T-cell nTPM: 51.7
Samples: 6
Max nTPM: 57.9
Min nTPM: 40.9
P10809_1014
56.5
P10809_1026
40.9
P10809_1045
57.9
P10809_1064
54.9
P10809_1086
51.0
P10809_1113
49.1
Memory CD8 T-cell nTPM: 54.2
Samples: 5
Max nTPM: 63.2
Min nTPM: 37.2
P10809_1012
55.4
P10809_1027
61.7
P10809_1046
63.2
P10809_1065
37.2
P10809_1111
53.4
Naive CD4 T-cell nTPM: 35.6
Samples: 6
Max nTPM: 39.4
Min nTPM: 31.9
P10809_1015
34.0
P10809_1030
38.6
P10809_1049
31.9
P10809_1068
32.7
P10809_1085
36.8
P10809_1112
39.4
Naive CD8 T-cell nTPM: 40.0
Samples: 6
Max nTPM: 50.7
Min nTPM: 35.9
P10809_1016
35.9
P10809_1031
37.1
P10809_1050
39.9
P10809_1069
38.2
P10809_1087
50.7
P10809_1110
38.3
T-reg nTPM: 73.4
Samples: 6
Max nTPM: 100.9
Min nTPM: 61.6
P10809_1018
67.3
P10809_1037
68.9
P10809_1056
61.6
P10809_1075
62.2
P10809_1094
79.5
P10809_1106
100.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
186.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 133.8
Samples: 4
Max nTPM: 175.4
Min nTPM: 102.9
RHH5202_R3573
121.3
RHH5230_R3602
175.4
RHH5259_R3631
102.9
RHH5288_R3660
135.4
Effector memory CD8 T-cell nTPM: 186.9
Samples: 4
Max nTPM: 223.2
Min nTPM: 161.1
RHH5203_R3574
174.2
RHH5231_R3603
223.2
RHH5260_R3632
189.2
RHH5289_R3661
161.1
MAIT T-cell nTPM: 115.2
Samples: 4
Max nTPM: 123.6
Min nTPM: 106.8
RHH5233_R3605
108.5
RHH5205_R3576
123.6
RHH5262_R3634
121.9
RHH5297_R3663
106.8
Memory CD4 T-cell TFH nTPM: 140.5
Samples: 4
Max nTPM: 160.3
Min nTPM: 126.0
RHH5300_R3666
139.3
RHH5236_R3608
160.3
RHH5265_R3637
126.0
RHH5208_R3579
136.5
Memory CD4 T-cell Th1 nTPM: 129.8
Samples: 4
Max nTPM: 138.5
Min nTPM: 116.3
RHH5210_R3581
136.1
RHH5302_R3668
128.2
RHH5238_R3610
116.3
RHH5267_R3639
138.5
Memory CD4 T-cell Th1/Th17 nTPM: 151.6
Samples: 4
Max nTPM: 181.1
Min nTPM: 128.7
RHH5303_R3669
128.7
RHH5211_R3582
181.1
RHH5239_R3611
138.8
RHH5268_R3640
157.9
Memory CD4 T-cell Th17 nTPM: 160.7
Samples: 4
Max nTPM: 195.6
Min nTPM: 133.7
RHH5304_R3670
144.1
RHH5212_R3583
169.4
RHH5240_R3612
195.6
RHH5269_R3641
133.7
Memory CD4 T-cell Th2 nTPM: 152.1
Samples: 4
Max nTPM: 177.9
Min nTPM: 122.4
RHH5305_R3671
146.6
RHH5213_R3584
177.9
RHH5241_R3613
122.4
RHH5270_R3642
161.4
Naive CD4 T-cell nTPM: 98.4
Samples: 4
Max nTPM: 105.7
Min nTPM: 84.0
RHH5306_R3672
105.0
RHH5214_R3585
98.9
RHH5242_R3614
84.0
RHH5271_R3643
105.7
Naive CD8 T-cell nTPM: 80.7
Samples: 4
Max nTPM: 98.5
Min nTPM: 67.6
RHH5201_R3572
67.6
RHH5229_R3601
98.5
RHH5258_R3630
83.0
RHH5287_R3659
73.8
Non-Vd2 gdTCR nTPM: 176.8
Samples: 4
Max nTPM: 212.7
Min nTPM: 137.3
RHH5235_R3607
212.7
RHH5264_R3636
190.0
RHH5207_R3578
167.0
RHH5299_R3665
137.3
T-reg nTPM: 157.0
Samples: 4
Max nTPM: 159.1
Min nTPM: 153.4
RHH5301_R3667
159.0
RHH5237_R3609
153.4
RHH5266_R3638
159.1
RHH5209_R3580
156.4
Terminal effector memory CD4 T-cell nTPM: 168.5
Samples: 2
Max nTPM: 200.8
Min nTPM: 136.1
RHH5243_R3615
200.8
RHH5272_R3644
136.1
Terminal effector memory CD8 T-cell nTPM: 177.1
Samples: 4
Max nTPM: 211.2
Min nTPM: 139.4
RHH5232_R3604
200.5
RHH5204_R3575
157.1
RHH5261_R3633
211.2
RHH5296_R3662
139.4
Vd2 gdTCR nTPM: 134.9
Samples: 4
Max nTPM: 145.4
Min nTPM: 123.6
RHH5234_R3606
123.6
RHH5206_R3577
145.4
RHH5263_R3635
142.7
RHH5298_R3664
127.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
