HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:79.5 nTPM
HPA Brain:64.2 nTPM
GTEx:79.5 nTPM
FANTOM5:111.7 Scaled Tags Per Million
Pig:27.3 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034500Antibody HPA034501
Glial cells Not detectedLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 64.2
Sample id Sample description nTPM
Hippocampus
nTPM: 50.8
1898 Male, age 80, left hemisphere 63.2
1855 Male, age 76, left hemisphere 54.7
2529 Female, age 94, left hemisphere 51.0
1911 Female, age 85, right hemisphere 47.8
2621 Female, age 67, right hemisphere 46.7
2148 Female, age 91, left hemisphere 41.5
Dentate gyrus
nTPM: 49.2
2010 Male, age 76, both hemispheres 59.6
2530 Female, age 94, left hemisphere 53.8
1927 Female, age 91, both hemispheres 52.8
2246 Female, age 85, both hemispheres 48.4
2528 Male, age 74, both hemispheres 41.7
2531 Female, age 67, both hemispheres 39.1
Entorhinal gyrus
nTPM: 47.4
1787 Male, age 76, left hemisphere 50.5
1938 Female, age 85, left hemisphere 49.9
2613 Female, age 94, left hemisphere 49.5
2686 Male, age 75, right hemisphere 48.4
2764 Male, age 80, right hemisphere 46.5
2117 Female, age 91, right hemisphere 39.4
Hippocampus, CA1
nTPM: 61.3
2749 Male, age 80, left hemisphere 97.0
2082 Female, age 91, right hemisphere 53.1
1873 Female, age 85, both hemispheres 52.7
2045 Male, age 76, both hemispheres 51.9
2527 Male, age 74, both hemispheres 51.8
Hippocampus, CA2
nTPM: 52.7
1892 Male, age 76, both hemispheres 64.5
1963 Male, age 80, left hemisphere 55.4
1940 Female, age 85, left hemisphere 54.0
2249 Male, age 74, both hemispheres 51.6
2113 Female, age 91, right hemisphere 47.8
2437 Female, age 94, left hemisphere 43.2
Hippocampus, CA3
nTPM: 56.6
2137 Male, age 80, left hemisphere 87.9
1867 Male, age 76, both hemispheres 65.6
2861 Female, age 67, both hemispheres 53.5
2436 Male, age 74, both hemispheres 46.1
2620 Female, age 94, left hemisphere 44.3
1891 Female, age 85, both hemispheres 42.2
Parahippocampal cortex
nTPM: 52.6
2245 Female, age 91, both hemispheres 66.2
1850 Male, age 80, both hemispheres 63.2
2250 Female, age 67, right hemisphere 55.6
2018 Male, age 76, both hemispheres 54.0
2532 Female, age 72, left hemisphere 53.2
1933 Female, age 85, both hemispheres 52.7
1990 Female, age 91, right hemisphere 50.2
2693 Female, age 94, both hemispheres 49.6
2622 Female, age 67, right hemisphere 43.2
2692 Male, age 74, both hemispheres 37.9
Perirhinal gyrus
nTPM: 64.2
1847 Female, age 91, left hemisphere 72.7
1794 Male, age 80, right hemisphere 69.6
1841 Female, age 85, right hemisphere 64.7
2521 Female, age 94, right hemisphere 63.5
2848 Male, age 76, right hemisphere 50.4
Subiculum
nTPM: 46.2
1901 Male, age 80, both hemispheres 60.0
1977 Female, age 85, both hemispheres 52.8
2042 Male, age 76, both hemispheres 47.6
2619 Male, age 74, both hemispheres 39.6
2729 Female, age 91, right hemisphere 38.7
2438 Female, age 94, left hemisphere 38.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 79.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 79.5
Samples: 197

Max nTPM: 176.5
Min nTPM: 42.0
Std nTPM: 22.9
Median nTPM: 76.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 176.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 161.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 155.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 140.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 135.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 135.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 132.9
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 125.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 121.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 119.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 118.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 111.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 111.7
FF:10153-102I9 76 years, female 114.4
FF:10169-103B7 60 years, female 109.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.3
Pig sample Sample description nTPM
Subiculum
nTPM: 24.7
Samples: 4

Max nTPM: 30.6
Min nTPM: 21.4
Sample A Female 30.6
Sample B Female 24.5
Sample C Male 22.4
Sample D Male 21.4
Dorsal hippocampus
nTPM: 25.8
Samples: 4

Max nTPM: 28.6
Min nTPM: 23.0
Sample A Female 28.6
Sample B Female 25.2
Sample C Male 26.3
Sample D Male 23.0
Entorhinal cortex
nTPM: 27.3
Samples: 4

Max nTPM: 28.9
Min nTPM: 26.3
Sample A Female 27.7
Sample B Female 28.9
Sample C Male 26.3
Sample D Male 26.4
Ventral hippocampus
nTPM: 24.2
Samples: 4

Max nTPM: 28.2
Min nTPM: 20.6
Sample A Female 23.1
Sample B Female 20.6
Sample C Male 24.7
Sample D Male 28.2

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