HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:78.4 nTPM
HPA Brain:101.9 nTPM
GTEx:78.4 nTPM
FANTOM5:287.9 Scaled Tags Per Million
Pig:74.0 nTPM
Mouse:222.9 nTPM
Allen mouse:4.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 101.9
Sample id Sample description nTPM
Hippocampus
nTPM: 93.5
2529 Female, age 94, left hemisphere 100.9
2148 Female, age 91, left hemisphere 100.1
1855 Male, age 76, left hemisphere 97.4
2621 Female, age 67, right hemisphere 92.7
1898 Male, age 80, left hemisphere 88.1
1911 Female, age 85, right hemisphere 81.7
Dentate gyrus
nTPM: 77.2
2528 Male, age 74, both hemispheres 106.8
2010 Male, age 76, both hemispheres 82.0
2246 Female, age 85, both hemispheres 79.6
2531 Female, age 67, both hemispheres 72.2
2530 Female, age 94, left hemisphere 63.2
1927 Female, age 91, both hemispheres 59.3
Entorhinal gyrus
nTPM: 83.3
2117 Female, age 91, right hemisphere 123.6
2764 Male, age 80, right hemisphere 113.0
1787 Male, age 76, left hemisphere 83.3
2686 Male, age 75, right hemisphere 68.1
1938 Female, age 85, left hemisphere 63.2
2613 Female, age 94, left hemisphere 48.8
Hippocampus, CA1
nTPM: 78.2
2527 Male, age 74, both hemispheres 110.2
2045 Male, age 76, both hemispheres 89.2
1873 Female, age 85, both hemispheres 72.1
2082 Female, age 91, right hemisphere 65.4
2749 Male, age 80, left hemisphere 53.9
Hippocampus, CA2
nTPM: 82.5
2249 Male, age 74, both hemispheres 98.3
1940 Female, age 85, left hemisphere 89.9
1963 Male, age 80, left hemisphere 82.5
2437 Female, age 94, left hemisphere 78.2
2113 Female, age 91, right hemisphere 76.6
1892 Male, age 76, both hemispheres 69.3
Hippocampus, CA3
nTPM: 78.2
2436 Male, age 74, both hemispheres 107.3
1867 Male, age 76, both hemispheres 83.6
2861 Female, age 67, both hemispheres 80.5
1891 Female, age 85, both hemispheres 80.0
2620 Female, age 94, left hemisphere 65.3
2137 Male, age 80, left hemisphere 52.8
Parahippocampal cortex
nTPM: 96.7
2532 Female, age 72, left hemisphere 150.9
2018 Male, age 76, both hemispheres 121.3
2622 Female, age 67, right hemisphere 108.1
1850 Male, age 80, both hemispheres 102.9
2245 Female, age 91, both hemispheres 98.1
1933 Female, age 85, both hemispheres 87.0
2693 Female, age 94, both hemispheres 84.2
2692 Male, age 74, both hemispheres 73.7
2250 Female, age 67, right hemisphere 70.9
1990 Female, age 91, right hemisphere 70.1
Perirhinal gyrus
nTPM: 101.9
1794 Male, age 80, right hemisphere 132.5
2848 Male, age 76, right hemisphere 119.3
1841 Female, age 85, right hemisphere 108.4
2521 Female, age 94, right hemisphere 80.8
1847 Female, age 91, left hemisphere 68.7
Subiculum
nTPM: 90.1
2729 Female, age 91, right hemisphere 110.6
2619 Male, age 74, both hemispheres 108.0
2438 Female, age 94, left hemisphere 98.9
2042 Male, age 76, both hemispheres 86.8
1977 Female, age 85, both hemispheres 70.3
1901 Male, age 80, both hemispheres 65.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 78.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 78.4
Samples: 197

Max nTPM: 303.9
Min nTPM: 19.2
Std nTPM: 36.7
Median nTPM: 72.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 303.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 191.9
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 188.1
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 178.5
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 163.1
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 162.9
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 152.2
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 147.6
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 147.3
GTEX-1EKGG-0011-R1b-SM-9QEI1 60-69 years, male 147.0
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 136.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 287.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 287.9
FF:10169-103B7 60 years, female 306.3
FF:10153-102I9 76 years, female 269.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 74.0
Pig sample Sample description nTPM
Subiculum
nTPM: 50.5
Samples: 4

Max nTPM: 58.8
Min nTPM: 38.5
Sample A Female 58.8
Sample B Female 38.5
Sample C Male 49.4
Sample D Male 55.4
Dorsal hippocampus
nTPM: 67.8
Samples: 4

Max nTPM: 90.2
Min nTPM: 42.3
Sample A Female 76.9
Sample B Female 42.3
Sample C Male 90.2
Sample D Male 61.7
Entorhinal cortex
nTPM: 74.0
Samples: 4

Max nTPM: 82.9
Min nTPM: 67.1
Sample A Female 82.9
Sample B Female 67.1
Sample C Male 72.7
Sample D Male 73.3
Ventral hippocampus
nTPM: 61.0
Samples: 4

Max nTPM: 76.6
Min nTPM: 43.3
Sample A Female 59.6
Sample B Female 43.3
Sample C Male 76.6
Sample D Male 64.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 222.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 222.9
Samples: 4

Max nTPM: 258.6
Min nTPM: 175.0
Sample A Male 246.5
Sample B Male 258.6
Sample C Female 211.4
Sample D Female 175.0
Hippocampal formation
nTPM: 146.6
Samples: 4

Max nTPM: 168.6
Min nTPM: 131.8
Sample A Male 168.6
Sample B Male 132.7
Sample C Female 131.8
Sample D Female 153.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.7
71836806 Antisense, RP_051017_02_A11, Mouse strain C57BL/6J (56 days, male) 5.6
413825 Antisense, RP_040809_01_G11, Mouse strain C57BL/6J (56 days, male) 3.9

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