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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
357.7
nTPM
Monaco:
885.2
nTPM
Schmiedel:
498.4
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
357.7
HPA sample
nTPM
gdT-cell nTPM: 357.7
Samples: 6
Max nTPM: 445.4
Min nTPM: 247.8
P10809_1007
332.2
P10809_1022
433.6
P10809_1041
445.4
P10809_1060
363.0
P10809_1077
324.1
P10809_1098
247.8
MAIT T-cell nTPM: 214.7
Samples: 6
Max nTPM: 245.6
Min nTPM: 159.0
P10809_1006
159.0
P10809_1024
200.8
P10809_1043
218.1
P10809_1062
239.7
P10809_1083
225.0
P10809_1097
245.6
Memory CD4 T-cell nTPM: 108.5
Samples: 6
Max nTPM: 203.7
Min nTPM: 48.9
P10809_1014
57.2
P10809_1026
90.3
P10809_1045
107.4
P10809_1064
203.7
P10809_1086
143.2
P10809_1113
48.9
Memory CD8 T-cell nTPM: 251.9
Samples: 5
Max nTPM: 364.4
Min nTPM: 172.5
P10809_1012
185.8
P10809_1027
231.1
P10809_1046
305.7
P10809_1065
364.4
P10809_1111
172.5
Naive CD4 T-cell nTPM: 134.2
Samples: 6
Max nTPM: 185.5
Min nTPM: 100.7
P10809_1015
103.0
P10809_1030
158.1
P10809_1049
140.1
P10809_1068
117.7
P10809_1085
185.5
P10809_1112
100.7
Naive CD8 T-cell nTPM: 263.0
Samples: 6
Max nTPM: 324.4
Min nTPM: 172.5
P10809_1016
234.4
P10809_1031
313.1
P10809_1050
294.5
P10809_1069
324.4
P10809_1087
239.1
P10809_1110
172.5
T-reg nTPM: 9.3
Samples: 6
Max nTPM: 14.9
Min nTPM: 3.8
P10809_1018
11.5
P10809_1037
14.9
P10809_1056
8.7
P10809_1075
3.8
P10809_1094
6.0
P10809_1106
10.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
885.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 315.5
Samples: 4
Max nTPM: 500.9
Min nTPM: 134.2
RHH5202_R3573
500.9
RHH5230_R3602
134.2
RHH5259_R3631
218.6
RHH5288_R3660
408.4
Effector memory CD8 T-cell nTPM: 596.0
Samples: 4
Max nTPM: 747.6
Min nTPM: 446.5
RHH5203_R3574
747.6
RHH5231_R3603
550.1
RHH5260_R3632
446.5
RHH5289_R3661
639.9
MAIT T-cell nTPM: 796.8
Samples: 4
Max nTPM: 966.2
Min nTPM: 691.0
RHH5233_R3605
691.0
RHH5205_R3576
778.8
RHH5262_R3634
751.3
RHH5297_R3663
966.2
Memory CD4 T-cell TFH nTPM: 52.0
Samples: 4
Max nTPM: 69.5
Min nTPM: 41.9
RHH5300_R3666
69.5
RHH5236_R3608
47.7
RHH5265_R3637
41.9
RHH5208_R3579
48.9
Memory CD4 T-cell Th1 nTPM: 175.8
Samples: 4
Max nTPM: 261.2
Min nTPM: 68.7
RHH5210_R3581
261.2
RHH5302_R3668
248.8
RHH5238_R3610
68.7
RHH5267_R3639
124.6
Memory CD4 T-cell Th1/Th17 nTPM: 305.0
Samples: 4
Max nTPM: 568.6
Min nTPM: 72.9
RHH5303_R3669
408.1
RHH5211_R3582
568.6
RHH5239_R3611
72.9
RHH5268_R3640
170.4
Memory CD4 T-cell Th17 nTPM: 217.0
Samples: 4
Max nTPM: 364.2
Min nTPM: 47.5
RHH5304_R3670
364.2
RHH5212_R3583
350.3
RHH5240_R3612
47.5
RHH5269_R3641
106.1
Memory CD4 T-cell Th2 nTPM: 172.2
Samples: 4
Max nTPM: 239.2
Min nTPM: 82.4
RHH5305_R3671
239.2
RHH5213_R3584
214.3
RHH5241_R3613
82.4
RHH5270_R3642
153.0
Naive CD4 T-cell nTPM: 203.3
Samples: 4
Max nTPM: 259.6
Min nTPM: 84.7
RHH5306_R3672
259.6
RHH5214_R3585
256.8
RHH5242_R3614
84.7
RHH5271_R3643
212.1
Naive CD8 T-cell nTPM: 271.9
Samples: 4
Max nTPM: 367.1
Min nTPM: 93.0
RHH5201_R3572
341.6
RHH5229_R3601
93.0
RHH5258_R3630
367.1
RHH5287_R3659
285.7
Non-Vd2 gdTCR nTPM: 746.4
Samples: 4
Max nTPM: 1064.4
Min nTPM: 355.3
RHH5235_R3607
355.3
RHH5264_R3636
851.5
RHH5207_R3578
1064.4
RHH5299_R3665
714.5
T-reg nTPM: 72.9
Samples: 4
Max nTPM: 99.8
Min nTPM: 54.9
RHH5301_R3667
99.8
RHH5237_R3609
54.9
RHH5266_R3638
56.0
RHH5209_R3580
80.9
Terminal effector memory CD4 T-cell nTPM: 435.8
Samples: 2
Max nTPM: 663.4
Min nTPM: 208.1
RHH5243_R3615
208.1
RHH5272_R3644
663.4
Terminal effector memory CD8 T-cell nTPM: 685.4
Samples: 4
Max nTPM: 1005.8
Min nTPM: 382.7
RHH5232_R3604
382.7
RHH5204_R3575
898.9
RHH5261_R3633
454.0
RHH5296_R3662
1005.8
Vd2 gdTCR nTPM: 885.2
Samples: 4
Max nTPM: 1603.7
Min nTPM: 581.1
RHH5234_R3606
581.1
RHH5206_R3577
1603.7
RHH5263_R3635
632.3
RHH5298_R3664
723.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
