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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
46.4
nTPM
Monaco:
125.5
nTPM
Schmiedel:
42.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
46.4
HPA sample
nTPM
gdT-cell nTPM: 21.7
Samples: 6
Max nTPM: 32.6
Min nTPM: 9.1
P10809_1007
32.6
P10809_1022
13.0
P10809_1041
22.6
P10809_1060
9.1
P10809_1077
22.7
P10809_1098
29.9
MAIT T-cell nTPM: 23.7
Samples: 6
Max nTPM: 37.8
Min nTPM: 10.5
P10809_1006
37.8
P10809_1024
10.5
P10809_1043
13.4
P10809_1062
20.8
P10809_1083
29.2
P10809_1097
30.4
Memory CD4 T-cell nTPM: 39.1
Samples: 6
Max nTPM: 65.1
Min nTPM: 14.4
P10809_1014
65.1
P10809_1026
60.0
P10809_1045
44.7
P10809_1064
35.3
P10809_1086
14.8
P10809_1113
14.4
Memory CD8 T-cell nTPM: 27.4
Samples: 5
Max nTPM: 50.7
Min nTPM: 8.1
P10809_1012
50.7
P10809_1027
8.1
P10809_1046
37.2
P10809_1065
15.7
P10809_1111
25.2
Naive CD4 T-cell nTPM: 46.4
Samples: 6
Max nTPM: 56.7
Min nTPM: 33.4
P10809_1015
56.1
P10809_1030
53.5
P10809_1049
56.7
P10809_1068
42.6
P10809_1085
36.2
P10809_1112
33.4
Naive CD8 T-cell nTPM: 30.8
Samples: 6
Max nTPM: 49.8
Min nTPM: 5.7
P10809_1016
49.8
P10809_1031
45.5
P10809_1050
28.7
P10809_1069
26.2
P10809_1087
5.7
P10809_1110
28.8
T-reg nTPM: 36.1
Samples: 6
Max nTPM: 98.3
Min nTPM: 2.7
P10809_1018
21.6
P10809_1037
34.1
P10809_1056
98.3
P10809_1075
28.5
P10809_1094
2.7
P10809_1106
31.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
125.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 83.6
Samples: 4
Max nTPM: 146.6
Min nTPM: 13.8
RHH5202_R3573
13.8
RHH5230_R3602
146.6
RHH5259_R3631
123.2
RHH5288_R3660
50.6
Effector memory CD8 T-cell nTPM: 49.7
Samples: 4
Max nTPM: 79.5
Min nTPM: 17.3
RHH5203_R3574
34.2
RHH5231_R3603
67.7
RHH5260_R3632
79.5
RHH5289_R3661
17.3
MAIT T-cell nTPM: 65.2
Samples: 4
Max nTPM: 109.0
Min nTPM: 15.5
RHH5233_R3605
15.5
RHH5205_R3576
81.9
RHH5262_R3634
109.0
RHH5297_R3663
54.3
Memory CD4 T-cell TFH nTPM: 88.6
Samples: 4
Max nTPM: 149.3
Min nTPM: 6.2
RHH5300_R3666
131.1
RHH5236_R3608
149.3
RHH5265_R3637
67.7
RHH5208_R3579
6.2
Memory CD4 T-cell Th1 nTPM: 100.6
Samples: 4
Max nTPM: 150.8
Min nTPM: 63.7
RHH5210_R3581
78.9
RHH5302_R3668
63.7
RHH5238_R3610
108.9
RHH5267_R3639
150.8
Memory CD4 T-cell Th1/Th17 nTPM: 86.2
Samples: 4
Max nTPM: 130.2
Min nTPM: 10.4
RHH5303_R3669
10.4
RHH5211_R3582
130.2
RHH5239_R3611
81.2
RHH5268_R3640
123.1
Memory CD4 T-cell Th17 nTPM: 74.9
Samples: 4
Max nTPM: 144.2
Min nTPM: 9.7
RHH5304_R3670
29.5
RHH5212_R3583
144.2
RHH5240_R3612
9.7
RHH5269_R3641
116.1
Memory CD4 T-cell Th2 nTPM: 98.4
Samples: 4
Max nTPM: 170.3
Min nTPM: 19.4
RHH5305_R3671
89.1
RHH5213_R3584
114.6
RHH5241_R3613
19.4
RHH5270_R3642
170.3
Naive CD4 T-cell nTPM: 117.1
Samples: 4
Max nTPM: 150.8
Min nTPM: 80.8
RHH5306_R3672
124.5
RHH5214_R3585
150.8
RHH5242_R3614
80.8
RHH5271_R3643
112.2
Naive CD8 T-cell nTPM: 83.3
Samples: 4
Max nTPM: 109.9
Min nTPM: 8.9
RHH5201_R3572
8.9
RHH5229_R3601
108.3
RHH5258_R3630
106.1
RHH5287_R3659
109.9
Non-Vd2 gdTCR nTPM: 35.4
Samples: 4
Max nTPM: 67.9
Min nTPM: 8.2
RHH5235_R3607
67.9
RHH5264_R3636
8.2
RHH5207_R3578
8.9
RHH5299_R3665
56.5
T-reg nTPM: 125.5
Samples: 4
Max nTPM: 179.2
Min nTPM: 89.9
RHH5301_R3667
89.9
RHH5237_R3609
179.2
RHH5266_R3638
128.6
RHH5209_R3580
104.4
Terminal effector memory CD4 T-cell nTPM: 57.0
Samples: 2
Max nTPM: 85.2
Min nTPM: 28.7
RHH5243_R3615
85.2
RHH5272_R3644
28.7
Terminal effector memory CD8 T-cell nTPM: 38.2
Samples: 4
Max nTPM: 75.4
Min nTPM: 11.5
RHH5232_R3604
25.4
RHH5204_R3575
40.5
RHH5261_R3633
75.4
RHH5296_R3662
11.5
Vd2 gdTCR nTPM: 57.0
Samples: 4
Max nTPM: 73.7
Min nTPM: 22.6
RHH5234_R3606
66.2
RHH5206_R3577
22.6
RHH5263_R3635
73.7
RHH5298_R3664
65.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
