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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
25.8
nTPM
Monaco:
156.7
nTPM
Schmiedel:
187.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
25.8
HPA sample
nTPM
gdT-cell nTPM: 25.8
Samples: 6
Max nTPM: 29.2
Min nTPM: 23.1
P10809_1007
24.6
P10809_1022
29.2
P10809_1041
25.3
P10809_1060
25.2
P10809_1077
27.4
P10809_1098
23.1
MAIT T-cell nTPM: 24.7
Samples: 6
Max nTPM: 31.9
Min nTPM: 18.2
P10809_1006
31.9
P10809_1024
18.2
P10809_1043
31.3
P10809_1062
27.2
P10809_1083
18.7
P10809_1097
20.9
Memory CD4 T-cell nTPM: 18.9
Samples: 6
Max nTPM: 22.4
Min nTPM: 10.5
P10809_1014
20.1
P10809_1026
10.5
P10809_1045
21.9
P10809_1064
22.4
P10809_1086
19.5
P10809_1113
19.1
Memory CD8 T-cell nTPM: 23.9
Samples: 5
Max nTPM: 31.1
Min nTPM: 18.2
P10809_1012
31.1
P10809_1027
25.7
P10809_1046
23.5
P10809_1065
21.2
P10809_1111
18.2
Naive CD4 T-cell nTPM: 20.0
Samples: 6
Max nTPM: 26.2
Min nTPM: 14.0
P10809_1015
22.4
P10809_1030
14.0
P10809_1049
16.4
P10809_1068
23.5
P10809_1085
26.2
P10809_1112
17.7
Naive CD8 T-cell nTPM: 24.1
Samples: 6
Max nTPM: 29.2
Min nTPM: 18.1
P10809_1016
25.3
P10809_1031
23.9
P10809_1050
27.3
P10809_1069
29.2
P10809_1087
20.7
P10809_1110
18.1
T-reg nTPM: 24.9
Samples: 6
Max nTPM: 30.3
Min nTPM: 20.8
P10809_1018
24.4
P10809_1037
20.8
P10809_1056
23.2
P10809_1075
26.5
P10809_1094
24.2
P10809_1106
30.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
156.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 108.2
Samples: 4
Max nTPM: 126.7
Min nTPM: 85.8
RHH5202_R3573
126.7
RHH5230_R3602
105.3
RHH5259_R3631
114.8
RHH5288_R3660
85.8
Effector memory CD8 T-cell nTPM: 135.5
Samples: 4
Max nTPM: 151.0
Min nTPM: 125.8
RHH5203_R3574
128.2
RHH5231_R3603
125.8
RHH5260_R3632
151.0
RHH5289_R3661
137.0
MAIT T-cell nTPM: 129.1
Samples: 4
Max nTPM: 152.1
Min nTPM: 82.0
RHH5233_R3605
141.2
RHH5205_R3576
152.1
RHH5262_R3634
141.1
RHH5297_R3663
82.0
Memory CD4 T-cell TFH nTPM: 110.7
Samples: 4
Max nTPM: 127.1
Min nTPM: 91.1
RHH5300_R3666
91.1
RHH5236_R3608
121.2
RHH5265_R3637
103.3
RHH5208_R3579
127.1
Memory CD4 T-cell Th1 nTPM: 92.6
Samples: 4
Max nTPM: 109.3
Min nTPM: 73.3
RHH5210_R3581
109.3
RHH5302_R3668
84.4
RHH5238_R3610
73.3
RHH5267_R3639
103.5
Memory CD4 T-cell Th1/Th17 nTPM: 102.3
Samples: 4
Max nTPM: 119.1
Min nTPM: 88.5
RHH5303_R3669
119.1
RHH5211_R3582
103.5
RHH5239_R3611
88.5
RHH5268_R3640
98.2
Memory CD4 T-cell Th17 nTPM: 114.1
Samples: 4
Max nTPM: 132.3
Min nTPM: 99.3
RHH5304_R3670
106.5
RHH5212_R3583
99.3
RHH5240_R3612
132.3
RHH5269_R3641
118.1
Memory CD4 T-cell Th2 nTPM: 97.8
Samples: 4
Max nTPM: 109.6
Min nTPM: 84.7
RHH5305_R3671
84.7
RHH5213_R3584
109.6
RHH5241_R3613
104.7
RHH5270_R3642
92.2
Naive CD4 T-cell nTPM: 84.8
Samples: 4
Max nTPM: 89.6
Min nTPM: 71.5
RHH5306_R3672
71.5
RHH5214_R3585
89.6
RHH5242_R3614
88.7
RHH5271_R3643
89.5
Naive CD8 T-cell nTPM: 101.4
Samples: 4
Max nTPM: 114.5
Min nTPM: 92.8
RHH5201_R3572
104.8
RHH5229_R3601
114.5
RHH5258_R3630
92.8
RHH5287_R3659
93.3
Non-Vd2 gdTCR nTPM: 156.7
Samples: 4
Max nTPM: 179.6
Min nTPM: 133.1
RHH5235_R3607
150.0
RHH5264_R3636
164.2
RHH5207_R3578
179.6
RHH5299_R3665
133.1
T-reg nTPM: 92.2
Samples: 4
Max nTPM: 100.2
Min nTPM: 85.8
RHH5301_R3667
85.8
RHH5237_R3609
94.5
RHH5266_R3638
100.2
RHH5209_R3580
88.2
Terminal effector memory CD4 T-cell nTPM: 132.0
Samples: 2
Max nTPM: 133.8
Min nTPM: 130.2
RHH5243_R3615
133.8
RHH5272_R3644
130.2
Terminal effector memory CD8 T-cell nTPM: 149.3
Samples: 4
Max nTPM: 163.1
Min nTPM: 127.5
RHH5232_R3604
163.1
RHH5204_R3575
127.5
RHH5261_R3633
161.5
RHH5296_R3662
145.0
Vd2 gdTCR nTPM: 119.8
Samples: 4
Max nTPM: 149.5
Min nTPM: 87.0
RHH5234_R3606
108.3
RHH5206_R3577
134.2
RHH5263_R3635
149.5
RHH5298_R3664
87.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
