HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:26.4 nTPM
HPA Brain:25.7 nTPM
GTEx:26.4 nTPM
FANTOM5:149.4 Scaled Tags Per Million
Pig:54.6 nTPM
Mouse:68.7 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043850Antibody HPA056926
Glial cells Not detectedMedium
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.7
Sample id Sample description nTPM
Hippocampus
nTPM: 19.0
1898 Male, age 80, left hemisphere 28.3
2621 Female, age 67, right hemisphere 18.3
2148 Female, age 91, left hemisphere 17.4
1911 Female, age 85, right hemisphere 16.8
2529 Female, age 94, left hemisphere 16.7
1855 Male, age 76, left hemisphere 16.2
Dentate gyrus
nTPM: 18.7
1927 Female, age 91, both hemispheres 24.1
2010 Male, age 76, both hemispheres 22.1
2246 Female, age 85, both hemispheres 18.4
2530 Female, age 94, left hemisphere 17.1
2528 Male, age 74, both hemispheres 15.4
2531 Female, age 67, both hemispheres 15.1
Entorhinal gyrus
nTPM: 20.2
1938 Female, age 85, left hemisphere 25.6
2764 Male, age 80, right hemisphere 22.0
1787 Male, age 76, left hemisphere 21.4
2117 Female, age 91, right hemisphere 20.0
2686 Male, age 75, right hemisphere 16.4
2613 Female, age 94, left hemisphere 15.8
Hippocampus, CA1
nTPM: 25.7
2749 Male, age 80, left hemisphere 42.0
1873 Female, age 85, both hemispheres 25.5
2527 Male, age 74, both hemispheres 22.4
2045 Male, age 76, both hemispheres 21.8
2082 Female, age 91, right hemisphere 16.8
Hippocampus, CA2
nTPM: 21.7
1963 Male, age 80, left hemisphere 26.6
1892 Male, age 76, both hemispheres 26.1
2249 Male, age 74, both hemispheres 23.7
1940 Female, age 85, left hemisphere 18.7
2113 Female, age 91, right hemisphere 17.6
2437 Female, age 94, left hemisphere 17.6
Hippocampus, CA3
nTPM: 23.1
2137 Male, age 80, left hemisphere 32.1
1867 Male, age 76, both hemispheres 30.9
2436 Male, age 74, both hemispheres 20.5
1891 Female, age 85, both hemispheres 20.0
2620 Female, age 94, left hemisphere 19.6
2861 Female, age 67, both hemispheres 15.4
Parahippocampal cortex
nTPM: 19.2
1850 Male, age 80, both hemispheres 24.2
1933 Female, age 85, both hemispheres 23.5
1990 Female, age 91, right hemisphere 21.8
2018 Male, age 76, both hemispheres 21.1
2693 Female, age 94, both hemispheres 20.4
2250 Female, age 67, right hemisphere 20.1
2532 Female, age 72, left hemisphere 17.5
2245 Female, age 91, both hemispheres 16.3
2692 Male, age 74, both hemispheres 14.8
2622 Female, age 67, right hemisphere 11.9
Perirhinal gyrus
nTPM: 23.2
1841 Female, age 85, right hemisphere 27.2
1847 Female, age 91, left hemisphere 26.0
1794 Male, age 80, right hemisphere 24.4
2521 Female, age 94, right hemisphere 23.1
2848 Male, age 76, right hemisphere 15.1
Subiculum
nTPM: 21.1
1901 Male, age 80, both hemispheres 27.5
2042 Male, age 76, both hemispheres 22.8
1977 Female, age 85, both hemispheres 21.2
2619 Male, age 74, both hemispheres 21.2
2438 Female, age 94, left hemisphere 17.8
2729 Female, age 91, right hemisphere 15.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.4
Samples: 197

Max nTPM: 232.3
Min nTPM: 13.4
Std nTPM: 17.0
Median nTPM: 23.5
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 232.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 70.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 67.2
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 60.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 59.9
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 56.6
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 46.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 44.0
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 43.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 42.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 40.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 149.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 149.4
FF:10169-103B7 60 years, female 166.1
FF:10153-102I9 76 years, female 132.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 54.6
Pig sample Sample description nTPM
Subiculum
nTPM: 54.6
Samples: 4

Max nTPM: 58.3
Min nTPM: 49.5
Sample A Female 49.5
Sample B Female 56.5
Sample C Male 58.3
Sample D Male 54.1
Dorsal hippocampus
nTPM: 54.4
Samples: 4

Max nTPM: 69.2
Min nTPM: 43.4
Sample A Female 43.4
Sample B Female 51.5
Sample C Male 53.3
Sample D Male 69.2
Entorhinal cortex
nTPM: 50.5
Samples: 4

Max nTPM: 53.7
Min nTPM: 46.0
Sample A Female 53.7
Sample B Female 46.0
Sample C Male 50.2
Sample D Male 52.0
Ventral hippocampus
nTPM: 52.7
Samples: 4

Max nTPM: 59.4
Min nTPM: 45.7
Sample A Female 50.0
Sample B Female 59.4
Sample C Male 45.7
Sample D Male 55.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 68.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 63.9
Samples: 4

Max nTPM: 74.9
Min nTPM: 57.0
Sample A Male 60.9
Sample B Male 62.6
Sample C Female 74.9
Sample D Female 57.0
Hippocampal formation
nTPM: 68.7
Samples: 4

Max nTPM: 76.2
Min nTPM: 64.2
Sample A Male 76.2
Sample B Male 65.3
Sample C Female 64.2
Sample D Female 69.1

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