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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
65.2
nTPM
Monaco:
235.9
nTPM
Schmiedel:
265.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
65.2
HPA sample
nTPM
gdT-cell nTPM: 64.5
Samples: 6
Max nTPM: 75.8
Min nTPM: 49.7
P10809_1007
65.8
P10809_1022
66.1
P10809_1041
49.7
P10809_1060
75.8
P10809_1077
68.6
P10809_1098
61.1
MAIT T-cell nTPM: 52.5
Samples: 6
Max nTPM: 81.2
Min nTPM: 29.9
P10809_1006
81.2
P10809_1024
45.0
P10809_1043
41.3
P10809_1062
58.9
P10809_1083
58.4
P10809_1097
29.9
Memory CD4 T-cell nTPM: 43.1
Samples: 6
Max nTPM: 63.1
Min nTPM: 31.1
P10809_1014
63.1
P10809_1026
31.1
P10809_1045
38.0
P10809_1064
44.0
P10809_1086
45.9
P10809_1113
36.4
Memory CD8 T-cell nTPM: 65.2
Samples: 5
Max nTPM: 85.4
Min nTPM: 56.3
P10809_1012
85.4
P10809_1027
63.3
P10809_1046
60.3
P10809_1065
60.7
P10809_1111
56.3
Naive CD4 T-cell nTPM: 33.7
Samples: 6
Max nTPM: 46.9
Min nTPM: 13.2
P10809_1015
44.1
P10809_1030
23.5
P10809_1049
13.2
P10809_1068
39.9
P10809_1085
46.9
P10809_1112
34.5
Naive CD8 T-cell nTPM: 44.7
Samples: 6
Max nTPM: 64.5
Min nTPM: 25.1
P10809_1016
51.2
P10809_1031
35.4
P10809_1050
31.5
P10809_1069
60.6
P10809_1087
64.5
P10809_1110
25.1
T-reg nTPM: 54.3
Samples: 6
Max nTPM: 101.8
Min nTPM: 30.8
P10809_1018
101.8
P10809_1037
41.1
P10809_1056
30.8
P10809_1075
46.6
P10809_1094
62.5
P10809_1106
42.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
235.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 227.6
Samples: 4
Max nTPM: 240.5
Min nTPM: 214.3
RHH5202_R3573
230.0
RHH5230_R3602
214.3
RHH5259_R3631
240.5
RHH5288_R3660
225.7
Effector memory CD8 T-cell nTPM: 235.0
Samples: 4
Max nTPM: 275.2
Min nTPM: 198.5
RHH5203_R3574
275.2
RHH5231_R3603
198.5
RHH5260_R3632
262.1
RHH5289_R3661
204.3
MAIT T-cell nTPM: 176.3
Samples: 4
Max nTPM: 203.3
Min nTPM: 134.6
RHH5233_R3605
203.3
RHH5205_R3576
198.1
RHH5262_R3634
169.3
RHH5297_R3663
134.6
Memory CD4 T-cell TFH nTPM: 168.7
Samples: 4
Max nTPM: 211.2
Min nTPM: 128.7
RHH5300_R3666
128.7
RHH5236_R3608
153.4
RHH5265_R3637
181.4
RHH5208_R3579
211.2
Memory CD4 T-cell Th1 nTPM: 190.1
Samples: 4
Max nTPM: 230.9
Min nTPM: 157.2
RHH5210_R3581
157.2
RHH5302_R3668
164.0
RHH5238_R3610
230.9
RHH5267_R3639
208.3
Memory CD4 T-cell Th1/Th17 nTPM: 182.0
Samples: 4
Max nTPM: 206.8
Min nTPM: 155.0
RHH5303_R3669
155.0
RHH5211_R3582
179.5
RHH5239_R3611
206.8
RHH5268_R3640
186.6
Memory CD4 T-cell Th17 nTPM: 158.1
Samples: 4
Max nTPM: 186.9
Min nTPM: 137.1
RHH5304_R3670
137.1
RHH5212_R3583
162.5
RHH5240_R3612
186.9
RHH5269_R3641
146.0
Memory CD4 T-cell Th2 nTPM: 147.8
Samples: 4
Max nTPM: 161.4
Min nTPM: 132.8
RHH5305_R3671
132.8
RHH5213_R3584
161.4
RHH5241_R3613
160.1
RHH5270_R3642
136.7
Naive CD4 T-cell nTPM: 126.4
Samples: 4
Max nTPM: 157.0
Min nTPM: 112.1
RHH5306_R3672
112.1
RHH5214_R3585
119.7
RHH5242_R3614
157.0
RHH5271_R3643
116.7
Naive CD8 T-cell nTPM: 120.5
Samples: 4
Max nTPM: 127.7
Min nTPM: 109.6
RHH5201_R3572
127.6
RHH5229_R3601
116.9
RHH5258_R3630
109.6
RHH5287_R3659
127.7
Non-Vd2 gdTCR nTPM: 227.8
Samples: 4
Max nTPM: 272.7
Min nTPM: 163.5
RHH5235_R3607
272.7
RHH5264_R3636
232.7
RHH5207_R3578
242.1
RHH5299_R3665
163.5
T-reg nTPM: 147.6
Samples: 4
Max nTPM: 161.8
Min nTPM: 130.6
RHH5301_R3667
130.6
RHH5237_R3609
161.8
RHH5266_R3638
145.7
RHH5209_R3580
152.2
Terminal effector memory CD4 T-cell nTPM: 236.0
Samples: 2
Max nTPM: 254.0
Min nTPM: 217.9
RHH5243_R3615
254.0
RHH5272_R3644
217.9
Terminal effector memory CD8 T-cell nTPM: 232.7
Samples: 4
Max nTPM: 266.4
Min nTPM: 194.0
RHH5232_R3604
258.1
RHH5204_R3575
212.1
RHH5261_R3633
266.4
RHH5296_R3662
194.0
Vd2 gdTCR nTPM: 213.2
Samples: 4
Max nTPM: 251.5
Min nTPM: 155.4
RHH5234_R3606
224.5
RHH5206_R3577
221.5
RHH5263_R3635
251.5
RHH5298_R3664
155.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.