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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
299.1
nTPM
Monaco:
1077.4
nTPM
Schmiedel:
72.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
299.1
HPA sample
nTPM
gdT-cell nTPM: 299.1
Samples: 6
Max nTPM: 405.8
Min nTPM: 237.9
P10809_1007
280.0
P10809_1022
405.8
P10809_1041
291.9
P10809_1060
252.4
P10809_1077
326.7
P10809_1098
237.9
MAIT T-cell nTPM: 157.8
Samples: 6
Max nTPM: 217.6
Min nTPM: 123.6
P10809_1006
170.3
P10809_1024
217.6
P10809_1043
157.4
P10809_1062
128.5
P10809_1083
123.6
P10809_1097
149.1
Memory CD4 T-cell nTPM: 52.4
Samples: 6
Max nTPM: 135.7
Min nTPM: 5.6
P10809_1014
15.3
P10809_1026
15.7
P10809_1045
27.5
P10809_1064
114.8
P10809_1086
135.7
P10809_1113
5.6
Memory CD8 T-cell nTPM: 218.7
Samples: 5
Max nTPM: 278.5
Min nTPM: 159.9
P10809_1012
167.5
P10809_1027
278.5
P10809_1046
215.7
P10809_1065
271.8
P10809_1111
159.9
Naive CD4 T-cell nTPM: 14.5
Samples: 6
Max nTPM: 65.0
Min nTPM: 0.8
P10809_1015
4.3
P10809_1030
0.8
P10809_1049
4.1
P10809_1068
11.2
P10809_1085
65.0
P10809_1112
1.5
Naive CD8 T-cell nTPM: 162.3
Samples: 6
Max nTPM: 356.9
Min nTPM: 25.4
P10809_1016
25.4
P10809_1031
160.2
P10809_1050
143.3
P10809_1069
230.4
P10809_1087
356.9
P10809_1110
57.3
T-reg nTPM: 5.7
Samples: 6
Max nTPM: 11.8
Min nTPM: 0.9
P10809_1018
5.9
P10809_1037
9.4
P10809_1056
0.9
P10809_1075
2.8
P10809_1094
3.5
P10809_1106
11.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1077.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 179.8
Samples: 4
Max nTPM: 220.1
Min nTPM: 122.9
RHH5202_R3573
122.9
RHH5230_R3602
201.0
RHH5259_R3631
220.1
RHH5288_R3660
175.0
Effector memory CD8 T-cell nTPM: 956.6
Samples: 4
Max nTPM: 990.7
Min nTPM: 909.7
RHH5203_R3574
964.1
RHH5231_R3603
961.8
RHH5260_R3632
909.7
RHH5289_R3661
990.7
MAIT T-cell nTPM: 418.5
Samples: 4
Max nTPM: 456.8
Min nTPM: 368.0
RHH5233_R3605
437.9
RHH5205_R3576
456.8
RHH5262_R3634
411.3
RHH5297_R3663
368.0
Memory CD4 T-cell TFH nTPM: 24.8
Samples: 4
Max nTPM: 37.6
Min nTPM: 14.6
RHH5300_R3666
14.6
RHH5236_R3608
37.6
RHH5265_R3637
23.0
RHH5208_R3579
24.0
Memory CD4 T-cell Th1 nTPM: 77.4
Samples: 4
Max nTPM: 98.9
Min nTPM: 52.0
RHH5210_R3581
69.8
RHH5302_R3668
52.0
RHH5238_R3610
88.7
RHH5267_R3639
98.9
Memory CD4 T-cell Th1/Th17 nTPM: 101.7
Samples: 4
Max nTPM: 119.9
Min nTPM: 75.5
RHH5303_R3669
105.6
RHH5211_R3582
105.8
RHH5239_R3611
75.5
RHH5268_R3640
119.9
Memory CD4 T-cell Th17 nTPM: 62.8
Samples: 4
Max nTPM: 114.3
Min nTPM: 38.5
RHH5304_R3670
114.3
RHH5212_R3583
47.8
RHH5240_R3612
38.5
RHH5269_R3641
50.6
Memory CD4 T-cell Th2 nTPM: 35.6
Samples: 4
Max nTPM: 53.3
Min nTPM: 17.7
RHH5305_R3671
17.7
RHH5213_R3584
41.3
RHH5241_R3613
53.3
RHH5270_R3642
30.0
Naive CD4 T-cell nTPM: 24.9
Samples: 4
Max nTPM: 38.0
Min nTPM: 14.1
RHH5306_R3672
14.1
RHH5214_R3585
23.4
RHH5242_R3614
38.0
RHH5271_R3643
23.9
Naive CD8 T-cell nTPM: 5.2
Samples: 4
Max nTPM: 7.5
Min nTPM: 1.8
RHH5201_R3572
7.5
RHH5229_R3601
6.6
RHH5258_R3630
4.7
RHH5287_R3659
1.8
Non-Vd2 gdTCR nTPM: 965.4
Samples: 4
Max nTPM: 1091.9
Min nTPM: 846.9
RHH5235_R3607
861.7
RHH5264_R3636
1061.0
RHH5207_R3578
1091.9
RHH5299_R3665
846.9
T-reg nTPM: 19.0
Samples: 4
Max nTPM: 29.6
Min nTPM: 12.5
RHH5301_R3667
12.5
RHH5237_R3609
13.3
RHH5266_R3638
20.6
RHH5209_R3580
29.6
Terminal effector memory CD4 T-cell nTPM: 956.8
Samples: 2
Max nTPM: 969.4
Min nTPM: 944.2
RHH5243_R3615
969.4
RHH5272_R3644
944.2
Terminal effector memory CD8 T-cell nTPM: 1077.4
Samples: 4
Max nTPM: 1226.1
Min nTPM: 969.2
RHH5232_R3604
1226.1
RHH5204_R3575
969.2
RHH5261_R3633
1056.7
RHH5296_R3662
1057.6
Vd2 gdTCR nTPM: 697.0
Samples: 4
Max nTPM: 999.4
Min nTPM: 506.7
RHH5234_R3606
527.9
RHH5206_R3577
999.4
RHH5263_R3635
753.8
RHH5298_R3664
506.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.