HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:23.3 nTPM
HPA Brain:29.1 nTPM
GTEx:23.3 nTPM
FANTOM5:53.0 Scaled Tags Per Million
Pig:30.3 nTPM
Mouse:14.0 nTPM
Allen mouse:10.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.1
Sample id Sample description nTPM
Hippocampus
nTPM: 27.2
1911 Female, age 85, right hemisphere 36.9
2621 Female, age 67, right hemisphere 26.7
1898 Male, age 80, left hemisphere 26.6
2529 Female, age 94, left hemisphere 25.3
1855 Male, age 76, left hemisphere 24.6
2148 Female, age 91, left hemisphere 23.1
Dentate gyrus
nTPM: 25.7
2010 Male, age 76, both hemispheres 27.7
2528 Male, age 74, both hemispheres 26.9
1927 Female, age 91, both hemispheres 26.5
2531 Female, age 67, both hemispheres 26.3
2246 Female, age 85, both hemispheres 24.4
2530 Female, age 94, left hemisphere 22.3
Entorhinal gyrus
nTPM: 28.5
1938 Female, age 85, left hemisphere 30.8
2613 Female, age 94, left hemisphere 30.3
2117 Female, age 91, right hemisphere 28.7
1787 Male, age 76, left hemisphere 27.8
2686 Male, age 75, right hemisphere 27.6
2764 Male, age 80, right hemisphere 25.7
Hippocampus, CA1
nTPM: 27.1
2749 Male, age 80, left hemisphere 28.7
2082 Female, age 91, right hemisphere 28.1
2045 Male, age 76, both hemispheres 27.3
1873 Female, age 85, both hemispheres 26.7
2527 Male, age 74, both hemispheres 24.6
Hippocampus, CA2
nTPM: 26.8
1940 Female, age 85, left hemisphere 29.3
1892 Male, age 76, both hemispheres 28.4
2113 Female, age 91, right hemisphere 26.8
2249 Male, age 74, both hemispheres 25.9
2437 Female, age 94, left hemisphere 25.6
1963 Male, age 80, left hemisphere 24.9
Hippocampus, CA3
nTPM: 28.5
1891 Female, age 85, both hemispheres 32.6
2137 Male, age 80, left hemisphere 30.2
2620 Female, age 94, left hemisphere 28.7
1867 Male, age 76, both hemispheres 28.4
2436 Male, age 74, both hemispheres 28.0
2861 Female, age 67, both hemispheres 23.3
Parahippocampal cortex
nTPM: 28.2
1850 Male, age 80, both hemispheres 30.9
1990 Female, age 91, right hemisphere 30.4
1933 Female, age 85, both hemispheres 29.7
2692 Male, age 74, both hemispheres 29.7
2693 Female, age 94, both hemispheres 29.6
2532 Female, age 72, left hemisphere 28.3
2622 Female, age 67, right hemisphere 27.8
2018 Male, age 76, both hemispheres 26.3
2250 Female, age 67, right hemisphere 25.0
2245 Female, age 91, both hemispheres 24.6
Perirhinal gyrus
nTPM: 28.0
2848 Male, age 76, right hemisphere 30.0
1841 Female, age 85, right hemisphere 28.9
2521 Female, age 94, right hemisphere 27.9
1794 Male, age 80, right hemisphere 27.3
1847 Female, age 91, left hemisphere 26.1
Subiculum
nTPM: 29.1
2438 Female, age 94, left hemisphere 32.4
2042 Male, age 76, both hemispheres 31.5
1901 Male, age 80, both hemispheres 31.3
1977 Female, age 85, both hemispheres 27.3
2619 Male, age 74, both hemispheres 26.8
2729 Female, age 91, right hemisphere 25.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.3
Samples: 197

Max nTPM: 52.5
Min nTPM: 10.1
Std nTPM: 6.8
Median nTPM: 22.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 52.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 47.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 46.8
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 46.8
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 41.3
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 40.4
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 40.0
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 39.0
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 37.9
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 37.0
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 36.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 53.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.0
FF:10153-102I9 76 years, female 58.2
FF:10169-103B7 60 years, female 47.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 30.3
Pig sample Sample description nTPM
Subiculum
nTPM: 30.0
Samples: 4

Max nTPM: 31.8
Min nTPM: 28.5
Sample A Female 28.6
Sample B Female 31.0
Sample C Male 28.5
Sample D Male 31.8
Dorsal hippocampus
nTPM: 30.3
Samples: 4

Max nTPM: 35.3
Min nTPM: 27.2
Sample A Female 27.7
Sample B Female 27.2
Sample C Male 30.8
Sample D Male 35.3
Entorhinal cortex
nTPM: 28.0
Samples: 4

Max nTPM: 29.2
Min nTPM: 25.3
Sample A Female 25.3
Sample B Female 28.7
Sample C Male 29.2
Sample D Male 28.7
Ventral hippocampus
nTPM: 28.4
Samples: 4

Max nTPM: 31.1
Min nTPM: 25.2
Sample A Female 28.4
Sample B Female 31.1
Sample C Male 25.2
Sample D Male 28.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.5
Samples: 4

Max nTPM: 14.8
Min nTPM: 10.0
Sample A Male 10.0
Sample B Male 14.8
Sample C Female 13.6
Sample D Female 11.5
Hippocampal formation
nTPM: 14.0
Samples: 4

Max nTPM: 16.4
Min nTPM: 11.3
Sample A Male 14.9
Sample B Male 16.4
Sample C Female 11.3
Sample D Female 13.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.6
68160841 Antisense, RP_041122_01_B01, Mouse strain C57BL/6J (56 days, male) 10.6

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