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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
69.7
nTPM
Monaco:
120.5
nTPM
Schmiedel:
243.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
69.7
HPA sample
nTPM
gdT-cell nTPM: 37.7
Samples: 6
Max nTPM: 57.5
Min nTPM: 27.9
P10809_1007
27.9
P10809_1022
49.1
P10809_1041
57.5
P10809_1060
34.3
P10809_1077
29.1
P10809_1098
28.4
MAIT T-cell nTPM: 45.7
Samples: 6
Max nTPM: 60.8
Min nTPM: 33.3
P10809_1006
49.6
P10809_1024
43.1
P10809_1043
60.8
P10809_1062
33.3
P10809_1083
34.9
P10809_1097
52.6
Memory CD4 T-cell nTPM: 45.4
Samples: 6
Max nTPM: 62.7
Min nTPM: 29.0
P10809_1014
37.7
P10809_1026
58.9
P10809_1045
62.7
P10809_1064
49.2
P10809_1086
35.0
P10809_1113
29.0
Memory CD8 T-cell nTPM: 42.4
Samples: 5
Max nTPM: 56.7
Min nTPM: 34.8
P10809_1012
39.8
P10809_1027
34.8
P10809_1046
56.7
P10809_1065
44.0
P10809_1111
36.6
Naive CD4 T-cell nTPM: 69.7
Samples: 6
Max nTPM: 93.7
Min nTPM: 51.8
P10809_1015
51.8
P10809_1030
64.9
P10809_1049
93.7
P10809_1068
81.9
P10809_1085
71.2
P10809_1112
54.7
Naive CD8 T-cell nTPM: 44.4
Samples: 6
Max nTPM: 61.3
Min nTPM: 27.1
P10809_1016
40.2
P10809_1031
47.0
P10809_1050
45.9
P10809_1069
61.3
P10809_1087
27.1
P10809_1110
45.0
T-reg nTPM: 45.3
Samples: 6
Max nTPM: 74.0
Min nTPM: 32.2
P10809_1018
32.2
P10809_1037
74.0
P10809_1056
45.0
P10809_1075
40.7
P10809_1094
41.0
P10809_1106
38.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
120.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 98.9
Samples: 4
Max nTPM: 115.5
Min nTPM: 83.9
RHH5202_R3573
100.9
RHH5230_R3602
95.3
RHH5259_R3631
115.5
RHH5288_R3660
83.9
Effector memory CD8 T-cell nTPM: 92.4
Samples: 4
Max nTPM: 97.8
Min nTPM: 86.4
RHH5203_R3574
97.8
RHH5231_R3603
95.1
RHH5260_R3632
90.4
RHH5289_R3661
86.4
MAIT T-cell nTPM: 104.4
Samples: 4
Max nTPM: 127.5
Min nTPM: 77.1
RHH5233_R3605
77.1
RHH5205_R3576
127.5
RHH5262_R3634
122.9
RHH5297_R3663
90.2
Memory CD4 T-cell TFH nTPM: 81.7
Samples: 4
Max nTPM: 95.5
Min nTPM: 69.5
RHH5300_R3666
72.9
RHH5236_R3608
95.5
RHH5265_R3637
88.9
RHH5208_R3579
69.5
Memory CD4 T-cell Th1 nTPM: 91.8
Samples: 4
Max nTPM: 102.5
Min nTPM: 72.5
RHH5210_R3581
101.7
RHH5302_R3668
72.5
RHH5238_R3610
90.6
RHH5267_R3639
102.5
Memory CD4 T-cell Th1/Th17 nTPM: 103.1
Samples: 4
Max nTPM: 119.1
Min nTPM: 89.4
RHH5303_R3669
89.4
RHH5211_R3582
114.5
RHH5239_R3611
119.1
RHH5268_R3640
89.4
Memory CD4 T-cell Th17 nTPM: 105.9
Samples: 4
Max nTPM: 116.6
Min nTPM: 96.7
RHH5304_R3670
96.7
RHH5212_R3583
116.6
RHH5240_R3612
96.9
RHH5269_R3641
113.2
Memory CD4 T-cell Th2 nTPM: 92.8
Samples: 4
Max nTPM: 124.1
Min nTPM: 73.5
RHH5305_R3671
73.5
RHH5213_R3584
90.1
RHH5241_R3613
83.6
RHH5270_R3642
124.1
Naive CD4 T-cell nTPM: 120.5
Samples: 4
Max nTPM: 137.6
Min nTPM: 95.1
RHH5306_R3672
126.7
RHH5214_R3585
122.5
RHH5242_R3614
95.1
RHH5271_R3643
137.6
Naive CD8 T-cell nTPM: 101.0
Samples: 4
Max nTPM: 105.1
Min nTPM: 94.1
RHH5201_R3572
94.1
RHH5229_R3601
101.3
RHH5258_R3630
105.1
RHH5287_R3659
103.3
Non-Vd2 gdTCR nTPM: 95.6
Samples: 4
Max nTPM: 127.6
Min nTPM: 73.0
RHH5235_R3607
127.6
RHH5264_R3636
86.8
RHH5207_R3578
94.8
RHH5299_R3665
73.0
T-reg nTPM: 96.1
Samples: 4
Max nTPM: 118.6
Min nTPM: 72.3
RHH5301_R3667
72.3
RHH5237_R3609
87.8
RHH5266_R3638
105.8
RHH5209_R3580
118.6
Terminal effector memory CD4 T-cell nTPM: 86.1
Samples: 2
Max nTPM: 97.7
Min nTPM: 74.5
RHH5243_R3615
74.5
RHH5272_R3644
97.7
Terminal effector memory CD8 T-cell nTPM: 88.4
Samples: 4
Max nTPM: 111.5
Min nTPM: 71.0
RHH5232_R3604
71.0
RHH5204_R3575
88.8
RHH5261_R3633
111.5
RHH5296_R3662
82.1
Vd2 gdTCR nTPM: 105.9
Samples: 4
Max nTPM: 139.8
Min nTPM: 81.9
RHH5234_R3606
81.9
RHH5206_R3577
114.9
RHH5263_R3635
139.8
RHH5298_R3664
86.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
