HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:3.2 nTPM
HPA Brain:124.2 nTPM
GTEx:3.2 nTPM
FANTOM5:76.2 Scaled Tags Per Million
Pig:143.4 nTPM
Mouse:120.0 nTPM
Allen mouse:10.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB028368
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 124.2
Sample id Sample description nTPM
Hippocampus
nTPM: 102.1
1898 Male, age 80, left hemisphere 143.0
2621 Female, age 67, right hemisphere 125.3
1855 Male, age 76, left hemisphere 116.0
2148 Female, age 91, left hemisphere 96.6
1911 Female, age 85, right hemisphere 85.1
2529 Female, age 94, left hemisphere 46.2
Dentate gyrus
nTPM: 100.3
1927 Female, age 91, both hemispheres 164.6
2010 Male, age 76, both hemispheres 117.4
2531 Female, age 67, both hemispheres 86.8
2246 Female, age 85, both hemispheres 85.8
2530 Female, age 94, left hemisphere 79.5
2528 Male, age 74, both hemispheres 67.8
Entorhinal gyrus
nTPM: 62.8
1938 Female, age 85, left hemisphere 85.0
2764 Male, age 80, right hemisphere 67.2
1787 Male, age 76, left hemisphere 65.0
2613 Female, age 94, left hemisphere 63.6
2686 Male, age 75, right hemisphere 51.4
2117 Female, age 91, right hemisphere 44.4
Hippocampus, CA1
nTPM: 124.2
2749 Male, age 80, left hemisphere 233.3
1873 Female, age 85, both hemispheres 150.6
2045 Male, age 76, both hemispheres 90.5
2527 Male, age 74, both hemispheres 78.0
2082 Female, age 91, right hemisphere 68.6
Hippocampus, CA2
nTPM: 103.6
1963 Male, age 80, left hemisphere 175.7
1892 Male, age 76, both hemispheres 141.6
2249 Male, age 74, both hemispheres 89.3
2113 Female, age 91, right hemisphere 77.6
1940 Female, age 85, left hemisphere 68.9
2437 Female, age 94, left hemisphere 68.3
Hippocampus, CA3
nTPM: 103.7
2137 Male, age 80, left hemisphere 185.1
2436 Male, age 74, both hemispheres 126.3
2861 Female, age 67, both hemispheres 96.6
1867 Male, age 76, both hemispheres 76.2
2620 Female, age 94, left hemisphere 74.7
1891 Female, age 85, both hemispheres 63.3
Parahippocampal cortex
nTPM: 72.1
2245 Female, age 91, both hemispheres 119.8
2693 Female, age 94, both hemispheres 86.4
1850 Male, age 80, both hemispheres 77.4
2018 Male, age 76, both hemispheres 76.0
2532 Female, age 72, left hemisphere 71.1
2250 Female, age 67, right hemisphere 69.8
2622 Female, age 67, right hemisphere 69.5
1990 Female, age 91, right hemisphere 64.2
1933 Female, age 85, both hemispheres 56.5
2692 Male, age 74, both hemispheres 30.0
Perirhinal gyrus
nTPM: 97.2
1847 Female, age 91, left hemisphere 107.4
1841 Female, age 85, right hemisphere 101.3
1794 Male, age 80, right hemisphere 101.1
2521 Female, age 94, right hemisphere 95.0
2848 Male, age 76, right hemisphere 81.5
Subiculum
nTPM: 61.5
1901 Male, age 80, both hemispheres 82.9
2729 Female, age 91, right hemisphere 73.0
1977 Female, age 85, both hemispheres 72.5
2042 Male, age 76, both hemispheres 60.9
2438 Female, age 94, left hemisphere 41.1
2619 Male, age 74, both hemispheres 38.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 3.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 3.2
Samples: 197

Max nTPM: 21.6
Min nTPM: 0.3
Std nTPM: 3.7
Median nTPM: 1.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 21.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 20.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 18.3
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 15.4
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 14.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 13.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 13.6
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 12.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 12.6
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 12.5
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 12.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 76.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 76.2
FF:10169-103B7 60 years, female 104.8
FF:10153-102I9 76 years, female 47.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 143.4
Pig sample Sample description nTPM
Subiculum
nTPM: 48.9
Samples: 4

Max nTPM: 88.8
Min nTPM: 31.2
Sample A Female 88.8
Sample B Female 39.8
Sample C Male 31.2
Sample D Male 35.7
Dorsal hippocampus
nTPM: 143.5
Samples: 4

Max nTPM: 182.9
Min nTPM: 44.4
Sample A Female 182.9
Sample B Female 177.4
Sample C Male 44.4
Sample D Male 169.1
Entorhinal cortex
nTPM: 89.8
Samples: 4

Max nTPM: 95.5
Min nTPM: 84.1
Sample A Female 95.5
Sample B Female 84.1
Sample C Male 86.8
Sample D Male 92.8
Ventral hippocampus
nTPM: 96.5
Samples: 4

Max nTPM: 133.3
Min nTPM: 63.8
Sample A Female 111.9
Sample B Female 63.8
Sample C Male 76.8
Sample D Male 133.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 120.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 66.0
Samples: 4

Max nTPM: 73.5
Min nTPM: 56.1
Sample A Male 67.1
Sample B Male 56.1
Sample C Female 67.4
Sample D Female 73.5
Hippocampal formation
nTPM: 120.0
Samples: 4

Max nTPM: 175.3
Min nTPM: 74.2
Sample A Male 89.2
Sample B Male 141.3
Sample C Female 175.3
Sample D Female 74.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.7
79591635 Antisense, RP_071204_04_F06, Mouse strain C57BL/6J (56 days, male) 14.0
79913272 Antisense, RP_071204_04_F06, Mouse strain C57BL/6J (56 days, male) 11.0
2187 Antisense, RP_Baylor_102757, Mouse strain C57BL/6J (56 days, male) 7.4

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