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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
44.7
nTPM
Monaco:
33.1
nTPM
Schmiedel:
33.9
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
44.7
HPA sample
nTPM
gdT-cell nTPM: 22.6
Samples: 6
Max nTPM: 30.3
Min nTPM: 11.1
P10809_1007
21.2
P10809_1022
30.3
P10809_1041
17.8
P10809_1060
26.3
P10809_1077
11.1
P10809_1098
28.9
MAIT T-cell nTPM: 31.9
Samples: 6
Max nTPM: 52.8
Min nTPM: 16.0
P10809_1006
30.0
P10809_1024
36.6
P10809_1043
16.0
P10809_1062
27.4
P10809_1083
28.4
P10809_1097
52.8
Memory CD4 T-cell nTPM: 34.7
Samples: 6
Max nTPM: 40.2
Min nTPM: 30.5
P10809_1014
32.4
P10809_1026
39.0
P10809_1045
30.5
P10809_1064
33.4
P10809_1086
32.5
P10809_1113
40.2
Memory CD8 T-cell nTPM: 27.1
Samples: 5
Max nTPM: 35.5
Min nTPM: 17.3
P10809_1012
24.6
P10809_1027
35.5
P10809_1046
17.3
P10809_1065
25.6
P10809_1111
32.3
Naive CD4 T-cell nTPM: 44.7
Samples: 6
Max nTPM: 52.5
Min nTPM: 26.8
P10809_1015
26.8
P10809_1030
44.3
P10809_1049
49.7
P10809_1068
51.5
P10809_1085
43.2
P10809_1112
52.5
Naive CD8 T-cell nTPM: 29.1
Samples: 6
Max nTPM: 42.5
Min nTPM: 14.4
P10809_1016
22.9
P10809_1031
34.3
P10809_1050
14.4
P10809_1069
36.2
P10809_1087
42.5
P10809_1110
24.5
T-reg nTPM: 27.7
Samples: 6
Max nTPM: 33.9
Min nTPM: 16.1
P10809_1018
26.9
P10809_1037
29.2
P10809_1056
27.5
P10809_1075
16.1
P10809_1094
33.9
P10809_1106
32.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
33.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 20.5
Samples: 4
Max nTPM: 27.7
Min nTPM: 13.2
RHH5202_R3573
24.1
RHH5230_R3602
13.2
RHH5259_R3631
17.1
RHH5288_R3660
27.7
Effector memory CD8 T-cell nTPM: 21.7
Samples: 4
Max nTPM: 23.4
Min nTPM: 18.8
RHH5203_R3574
21.0
RHH5231_R3603
23.4
RHH5260_R3632
18.8
RHH5289_R3661
23.4
MAIT T-cell nTPM: 16.7
Samples: 4
Max nTPM: 19.6
Min nTPM: 12.1
RHH5233_R3605
19.6
RHH5205_R3576
12.1
RHH5262_R3634
16.4
RHH5297_R3663
18.7
Memory CD4 T-cell TFH nTPM: 33.1
Samples: 4
Max nTPM: 41.8
Min nTPM: 27.3
RHH5300_R3666
27.3
RHH5236_R3608
41.8
RHH5265_R3637
31.2
RHH5208_R3579
32.2
Memory CD4 T-cell Th1 nTPM: 26.1
Samples: 4
Max nTPM: 29.8
Min nTPM: 21.4
RHH5210_R3581
29.8
RHH5302_R3668
29.4
RHH5238_R3610
23.8
RHH5267_R3639
21.4
Memory CD4 T-cell Th1/Th17 nTPM: 22.9
Samples: 4
Max nTPM: 29.6
Min nTPM: 16.4
RHH5303_R3669
29.6
RHH5211_R3582
26.5
RHH5239_R3611
16.4
RHH5268_R3640
19.0
Memory CD4 T-cell Th17 nTPM: 21.0
Samples: 4
Max nTPM: 35.2
Min nTPM: 15.0
RHH5304_R3670
18.5
RHH5212_R3583
35.2
RHH5240_R3612
15.1
RHH5269_R3641
15.0
Memory CD4 T-cell Th2 nTPM: 27.4
Samples: 4
Max nTPM: 33.8
Min nTPM: 23.3
RHH5305_R3671
33.8
RHH5213_R3584
28.2
RHH5241_R3613
24.4
RHH5270_R3642
23.3
Naive CD4 T-cell nTPM: 31.9
Samples: 4
Max nTPM: 40.1
Min nTPM: 25.9
RHH5306_R3672
40.1
RHH5214_R3585
29.7
RHH5242_R3614
31.8
RHH5271_R3643
25.9
Naive CD8 T-cell nTPM: 19.1
Samples: 4
Max nTPM: 25.6
Min nTPM: 12.8
RHH5201_R3572
25.6
RHH5229_R3601
12.8
RHH5258_R3630
21.7
RHH5287_R3659
16.1
Non-Vd2 gdTCR nTPM: 13.5
Samples: 4
Max nTPM: 21.6
Min nTPM: 9.7
RHH5235_R3607
9.7
RHH5264_R3636
21.6
RHH5207_R3578
12.0
RHH5299_R3665
10.7
T-reg nTPM: 26.2
Samples: 4
Max nTPM: 32.5
Min nTPM: 20.2
RHH5301_R3667
32.5
RHH5237_R3609
30.9
RHH5266_R3638
21.0
RHH5209_R3580
20.2
Terminal effector memory CD4 T-cell nTPM: 24.0
Samples: 2
Max nTPM: 27.1
Min nTPM: 20.9
RHH5243_R3615
20.9
RHH5272_R3644
27.1
Terminal effector memory CD8 T-cell nTPM: 13.5
Samples: 4
Max nTPM: 22.0
Min nTPM: 7.8
RHH5232_R3604
22.0
RHH5204_R3575
15.0
RHH5261_R3633
7.8
RHH5296_R3662
9.2
Vd2 gdTCR nTPM: 21.8
Samples: 4
Max nTPM: 30.5
Min nTPM: 16.1
RHH5234_R3606
24.4
RHH5206_R3577
16.1
RHH5263_R3635
16.3
RHH5298_R3664
30.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
