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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
577.7
nTPM
Monaco:
553.2
nTPM
Schmiedel:
58.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
577.7
HPA sample
nTPM
gdT-cell nTPM: 440.8
Samples: 6
Max nTPM: 635.5
Min nTPM: 336.0
P10809_1007
336.0
P10809_1022
445.8
P10809_1041
635.5
P10809_1060
382.8
P10809_1077
431.7
P10809_1098
412.7
MAIT T-cell nTPM: 462.7
Samples: 6
Max nTPM: 541.4
Min nTPM: 334.6
P10809_1006
334.6
P10809_1024
541.4
P10809_1043
493.9
P10809_1062
435.7
P10809_1083
457.9
P10809_1097
512.6
Memory CD4 T-cell nTPM: 467.2
Samples: 6
Max nTPM: 564.6
Min nTPM: 335.2
P10809_1014
335.2
P10809_1026
491.1
P10809_1045
564.6
P10809_1064
448.4
P10809_1086
501.0
P10809_1113
462.8
Memory CD8 T-cell nTPM: 480.4
Samples: 5
Max nTPM: 554.1
Min nTPM: 361.7
P10809_1012
361.7
P10809_1027
488.0
P10809_1046
554.1
P10809_1065
527.6
P10809_1111
470.6
Naive CD4 T-cell nTPM: 431.7
Samples: 6
Max nTPM: 617.0
Min nTPM: 310.6
P10809_1015
310.6
P10809_1030
422.8
P10809_1049
617.0
P10809_1068
396.6
P10809_1085
462.8
P10809_1112
380.1
Naive CD8 T-cell nTPM: 427.6
Samples: 6
Max nTPM: 512.8
Min nTPM: 266.6
P10809_1016
266.6
P10809_1031
450.9
P10809_1050
452.6
P10809_1069
475.9
P10809_1087
512.8
P10809_1110
406.5
T-reg nTPM: 577.7
Samples: 6
Max nTPM: 711.5
Min nTPM: 386.0
P10809_1018
386.0
P10809_1037
633.7
P10809_1056
711.5
P10809_1075
530.7
P10809_1094
539.2
P10809_1106
664.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
553.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 356.9
Samples: 4
Max nTPM: 445.4
Min nTPM: 253.7
RHH5202_R3573
438.6
RHH5230_R3602
289.7
RHH5259_R3631
253.7
RHH5288_R3660
445.4
Effector memory CD8 T-cell nTPM: 473.5
Samples: 4
Max nTPM: 540.6
Min nTPM: 367.0
RHH5203_R3574
475.7
RHH5231_R3603
540.6
RHH5260_R3632
367.0
RHH5289_R3661
510.5
MAIT T-cell nTPM: 423.9
Samples: 4
Max nTPM: 514.4
Min nTPM: 304.1
RHH5233_R3605
514.4
RHH5205_R3576
304.1
RHH5262_R3634
408.9
RHH5297_R3663
468.2
Memory CD4 T-cell TFH nTPM: 458.0
Samples: 4
Max nTPM: 623.5
Min nTPM: 319.3
RHH5300_R3666
319.3
RHH5236_R3608
623.5
RHH5265_R3637
449.4
RHH5208_R3579
439.9
Memory CD4 T-cell Th1 nTPM: 375.0
Samples: 4
Max nTPM: 466.1
Min nTPM: 303.3
RHH5210_R3581
466.1
RHH5302_R3668
416.3
RHH5238_R3610
314.2
RHH5267_R3639
303.3
Memory CD4 T-cell Th1/Th17 nTPM: 395.3
Samples: 4
Max nTPM: 535.2
Min nTPM: 221.7
RHH5303_R3669
508.5
RHH5211_R3582
535.2
RHH5239_R3611
221.7
RHH5268_R3640
315.9
Memory CD4 T-cell Th17 nTPM: 353.8
Samples: 4
Max nTPM: 459.4
Min nTPM: 289.4
RHH5304_R3670
344.9
RHH5212_R3583
459.4
RHH5240_R3612
321.6
RHH5269_R3641
289.4
Memory CD4 T-cell Th2 nTPM: 427.6
Samples: 4
Max nTPM: 528.1
Min nTPM: 363.6
RHH5305_R3671
363.6
RHH5213_R3584
418.1
RHH5241_R3613
528.1
RHH5270_R3642
400.4
Naive CD4 T-cell nTPM: 319.8
Samples: 4
Max nTPM: 364.8
Min nTPM: 271.6
RHH5306_R3672
271.6
RHH5214_R3585
364.8
RHH5242_R3614
352.9
RHH5271_R3643
290.0
Naive CD8 T-cell nTPM: 310.8
Samples: 4
Max nTPM: 383.2
Min nTPM: 170.1
RHH5201_R3572
374.7
RHH5229_R3601
170.1
RHH5258_R3630
383.2
RHH5287_R3659
315.2
Non-Vd2 gdTCR nTPM: 494.4
Samples: 4
Max nTPM: 606.9
Min nTPM: 348.4
RHH5235_R3607
348.4
RHH5264_R3636
606.9
RHH5207_R3578
526.8
RHH5299_R3665
495.5
T-reg nTPM: 380.0
Samples: 4
Max nTPM: 521.1
Min nTPM: 301.3
RHH5301_R3667
388.9
RHH5237_R3609
521.1
RHH5266_R3638
301.3
RHH5209_R3580
308.7
Terminal effector memory CD4 T-cell nTPM: 498.3
Samples: 2
Max nTPM: 586.3
Min nTPM: 410.2
RHH5243_R3615
410.2
RHH5272_R3644
586.3
Terminal effector memory CD8 T-cell nTPM: 553.2
Samples: 4
Max nTPM: 663.5
Min nTPM: 397.3
RHH5232_R3604
579.2
RHH5204_R3575
663.5
RHH5261_R3633
397.3
RHH5296_R3662
572.8
Vd2 gdTCR nTPM: 495.9
Samples: 4
Max nTPM: 612.8
Min nTPM: 390.1
RHH5234_R3606
532.9
RHH5206_R3577
612.8
RHH5263_R3635
390.1
RHH5298_R3664
447.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.