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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
116.7
nTPM
Monaco:
103.4
nTPM
Schmiedel:
86.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
116.7
HPA sample
nTPM
gdT-cell nTPM: 67.6
Samples: 6
Max nTPM: 98.9
Min nTPM: 42.4
P10809_1007
42.4
P10809_1022
72.4
P10809_1041
98.9
P10809_1060
55.1
P10809_1077
62.4
P10809_1098
74.5
MAIT T-cell nTPM: 79.2
Samples: 6
Max nTPM: 114.1
Min nTPM: 45.9
P10809_1006
45.9
P10809_1024
114.1
P10809_1043
77.7
P10809_1062
82.2
P10809_1083
70.9
P10809_1097
84.6
Memory CD4 T-cell nTPM: 82.1
Samples: 6
Max nTPM: 106.9
Min nTPM: 61.5
P10809_1014
61.5
P10809_1026
90.0
P10809_1045
106.9
P10809_1064
74.4
P10809_1086
71.2
P10809_1113
88.4
Memory CD8 T-cell nTPM: 76.2
Samples: 5
Max nTPM: 92.9
Min nTPM: 52.7
P10809_1012
52.7
P10809_1027
80.3
P10809_1046
91.9
P10809_1065
63.0
P10809_1111
92.9
Naive CD4 T-cell nTPM: 82.2
Samples: 6
Max nTPM: 114.3
Min nTPM: 46.5
P10809_1015
46.5
P10809_1030
90.5
P10809_1049
114.3
P10809_1068
84.8
P10809_1085
81.3
P10809_1112
76.0
Naive CD8 T-cell nTPM: 73.0
Samples: 6
Max nTPM: 86.5
Min nTPM: 48.9
P10809_1016
48.9
P10809_1031
80.6
P10809_1050
78.1
P10809_1069
71.4
P10809_1087
72.6
P10809_1110
86.5
T-reg nTPM: 116.7
Samples: 6
Max nTPM: 179.9
Min nTPM: 66.7
P10809_1018
66.7
P10809_1037
119.2
P10809_1056
179.9
P10809_1075
102.2
P10809_1094
116.8
P10809_1106
115.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
103.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 87.6
Samples: 4
Max nTPM: 114.3
Min nTPM: 66.1
RHH5202_R3573
96.2
RHH5230_R3602
73.9
RHH5259_R3631
66.1
RHH5288_R3660
114.3
Effector memory CD8 T-cell nTPM: 98.8
Samples: 4
Max nTPM: 136.3
Min nTPM: 67.3
RHH5203_R3574
136.3
RHH5231_R3603
92.0
RHH5260_R3632
67.3
RHH5289_R3661
99.7
MAIT T-cell nTPM: 97.4
Samples: 4
Max nTPM: 131.7
Min nTPM: 82.6
RHH5233_R3605
131.7
RHH5205_R3576
82.6
RHH5262_R3634
92.4
RHH5297_R3663
82.8
Memory CD4 T-cell TFH nTPM: 102.0
Samples: 4
Max nTPM: 133.2
Min nTPM: 85.1
RHH5300_R3666
133.2
RHH5236_R3608
89.0
RHH5265_R3637
100.8
RHH5208_R3579
85.1
Memory CD4 T-cell Th1 nTPM: 91.4
Samples: 4
Max nTPM: 115.6
Min nTPM: 61.8
RHH5210_R3581
109.6
RHH5302_R3668
115.6
RHH5238_R3610
61.8
RHH5267_R3639
78.5
Memory CD4 T-cell Th1/Th17 nTPM: 89.8
Samples: 4
Max nTPM: 132.5
Min nTPM: 58.7
RHH5303_R3669
132.5
RHH5211_R3582
101.1
RHH5239_R3611
58.7
RHH5268_R3640
66.8
Memory CD4 T-cell Th17 nTPM: 89.8
Samples: 4
Max nTPM: 113.2
Min nTPM: 73.7
RHH5304_R3670
86.2
RHH5212_R3583
113.2
RHH5240_R3612
85.9
RHH5269_R3641
73.7
Memory CD4 T-cell Th2 nTPM: 99.0
Samples: 4
Max nTPM: 115.1
Min nTPM: 72.3
RHH5305_R3671
115.1
RHH5213_R3584
107.0
RHH5241_R3613
101.7
RHH5270_R3642
72.3
Naive CD4 T-cell nTPM: 92.7
Samples: 4
Max nTPM: 118.4
Min nTPM: 70.3
RHH5306_R3672
79.4
RHH5214_R3585
118.4
RHH5242_R3614
102.5
RHH5271_R3643
70.3
Naive CD8 T-cell nTPM: 103.4
Samples: 4
Max nTPM: 123.1
Min nTPM: 64.7
RHH5201_R3572
123.1
RHH5229_R3601
64.7
RHH5258_R3630
111.3
RHH5287_R3659
114.6
Non-Vd2 gdTCR nTPM: 91.9
Samples: 4
Max nTPM: 121.4
Min nTPM: 51.7
RHH5235_R3607
51.7
RHH5264_R3636
107.4
RHH5207_R3578
87.2
RHH5299_R3665
121.4
T-reg nTPM: 92.9
Samples: 4
Max nTPM: 107.2
Min nTPM: 75.6
RHH5301_R3667
94.3
RHH5237_R3609
107.2
RHH5266_R3638
75.6
RHH5209_R3580
94.5
Terminal effector memory CD4 T-cell nTPM: 67.7
Samples: 2
Max nTPM: 84.9
Min nTPM: 50.4
RHH5243_R3615
50.4
RHH5272_R3644
84.9
Terminal effector memory CD8 T-cell nTPM: 82.0
Samples: 4
Max nTPM: 106.0
Min nTPM: 64.0
RHH5232_R3604
64.0
RHH5204_R3575
91.8
RHH5261_R3633
66.3
RHH5296_R3662
106.0
Vd2 gdTCR nTPM: 82.0
Samples: 4
Max nTPM: 86.4
Min nTPM: 78.6
RHH5234_R3606
82.3
RHH5206_R3577
80.5
RHH5263_R3635
78.6
RHH5298_R3664
86.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
