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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
79.1
nTPM
Monaco:
127.0
nTPM
Schmiedel:
80.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
79.1
HPA sample
nTPM
gdT-cell nTPM: 64.5
Samples: 6
Max nTPM: 73.8
Min nTPM: 50.9
P10809_1007
50.9
P10809_1022
73.8
P10809_1041
58.6
P10809_1060
70.8
P10809_1077
65.2
P10809_1098
67.9
MAIT T-cell nTPM: 63.3
Samples: 6
Max nTPM: 69.7
Min nTPM: 55.5
P10809_1006
64.0
P10809_1024
57.6
P10809_1043
69.7
P10809_1062
68.4
P10809_1083
55.5
P10809_1097
64.3
Memory CD4 T-cell nTPM: 59.7
Samples: 6
Max nTPM: 69.4
Min nTPM: 51.8
P10809_1014
51.8
P10809_1026
69.4
P10809_1045
58.6
P10809_1064
60.7
P10809_1086
55.8
P10809_1113
61.8
Memory CD8 T-cell nTPM: 70.4
Samples: 5
Max nTPM: 80.6
Min nTPM: 63.1
P10809_1012
68.9
P10809_1027
80.6
P10809_1046
63.1
P10809_1065
71.5
P10809_1111
67.7
Naive CD4 T-cell nTPM: 50.9
Samples: 6
Max nTPM: 63.0
Min nTPM: 37.0
P10809_1015
49.8
P10809_1030
41.7
P10809_1049
56.3
P10809_1068
63.0
P10809_1085
37.0
P10809_1112
57.3
Naive CD8 T-cell nTPM: 55.0
Samples: 6
Max nTPM: 72.4
Min nTPM: 47.5
P10809_1016
48.7
P10809_1031
72.4
P10809_1050
48.4
P10809_1069
53.5
P10809_1087
59.3
P10809_1110
47.5
T-reg nTPM: 79.1
Samples: 6
Max nTPM: 82.3
Min nTPM: 75.8
P10809_1018
75.8
P10809_1037
79.3
P10809_1056
80.4
P10809_1075
78.3
P10809_1094
82.3
P10809_1106
78.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
127.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 89.9
Samples: 4
Max nTPM: 97.2
Min nTPM: 73.3
RHH5202_R3573
73.3
RHH5230_R3602
97.2
RHH5259_R3631
94.3
RHH5288_R3660
94.8
Effector memory CD8 T-cell nTPM: 127.0
Samples: 4
Max nTPM: 147.4
Min nTPM: 117.8
RHH5203_R3574
118.8
RHH5231_R3603
147.4
RHH5260_R3632
117.8
RHH5289_R3661
124.1
MAIT T-cell nTPM: 107.8
Samples: 4
Max nTPM: 127.3
Min nTPM: 87.2
RHH5233_R3605
107.1
RHH5205_R3576
109.5
RHH5262_R3634
127.3
RHH5297_R3663
87.2
Memory CD4 T-cell TFH nTPM: 101.0
Samples: 4
Max nTPM: 129.1
Min nTPM: 83.7
RHH5300_R3666
89.8
RHH5236_R3608
101.2
RHH5265_R3637
129.1
RHH5208_R3579
83.7
Memory CD4 T-cell Th1 nTPM: 103.8
Samples: 4
Max nTPM: 108.0
Min nTPM: 93.2
RHH5210_R3581
106.2
RHH5302_R3668
93.2
RHH5238_R3610
107.7
RHH5267_R3639
108.0
Memory CD4 T-cell Th1/Th17 nTPM: 105.7
Samples: 4
Max nTPM: 112.0
Min nTPM: 95.2
RHH5303_R3669
95.2
RHH5211_R3582
112.0
RHH5239_R3611
106.3
RHH5268_R3640
109.4
Memory CD4 T-cell Th17 nTPM: 117.6
Samples: 4
Max nTPM: 123.7
Min nTPM: 107.9
RHH5304_R3670
107.9
RHH5212_R3583
118.8
RHH5240_R3612
119.8
RHH5269_R3641
123.7
Memory CD4 T-cell Th2 nTPM: 111.0
Samples: 4
Max nTPM: 130.4
Min nTPM: 88.3
RHH5305_R3671
99.4
RHH5213_R3584
126.0
RHH5241_R3613
88.3
RHH5270_R3642
130.4
Naive CD4 T-cell nTPM: 101.0
Samples: 4
Max nTPM: 121.2
Min nTPM: 82.4
RHH5306_R3672
82.4
RHH5214_R3585
121.2
RHH5242_R3614
99.1
RHH5271_R3643
101.1
Naive CD8 T-cell nTPM: 82.7
Samples: 4
Max nTPM: 95.4
Min nTPM: 67.5
RHH5201_R3572
95.4
RHH5229_R3601
67.5
RHH5258_R3630
81.5
RHH5287_R3659
86.4
Non-Vd2 gdTCR nTPM: 119.7
Samples: 4
Max nTPM: 138.8
Min nTPM: 101.0
RHH5235_R3607
129.9
RHH5264_R3636
108.9
RHH5207_R3578
138.8
RHH5299_R3665
101.0
T-reg nTPM: 104.2
Samples: 4
Max nTPM: 120.4
Min nTPM: 94.4
RHH5301_R3667
94.4
RHH5237_R3609
96.7
RHH5266_R3638
120.4
RHH5209_R3580
105.1
Terminal effector memory CD4 T-cell nTPM: 125.3
Samples: 2
Max nTPM: 136.2
Min nTPM: 114.3
RHH5243_R3615
114.3
RHH5272_R3644
136.2
Terminal effector memory CD8 T-cell nTPM: 123.1
Samples: 4
Max nTPM: 144.6
Min nTPM: 102.3
RHH5232_R3604
133.6
RHH5204_R3575
111.7
RHH5261_R3633
144.6
RHH5296_R3662
102.3
Vd2 gdTCR nTPM: 98.8
Samples: 4
Max nTPM: 110.8
Min nTPM: 84.0
RHH5234_R3606
84.0
RHH5206_R3577
104.4
RHH5263_R3635
110.8
RHH5298_R3664
95.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
