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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
253.2
nTPM
Monaco:
692.9
nTPM
Schmiedel:
308.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
253.2
HPA sample
nTPM
gdT-cell nTPM: 172.4
Samples: 6
Max nTPM: 275.8
Min nTPM: 111.3
P10809_1007
131.6
P10809_1022
111.3
P10809_1041
134.2
P10809_1060
179.4
P10809_1077
202.1
P10809_1098
275.8
MAIT T-cell nTPM: 194.8
Samples: 6
Max nTPM: 310.0
Min nTPM: 146.3
P10809_1006
188.6
P10809_1024
158.8
P10809_1043
147.2
P10809_1062
218.0
P10809_1083
146.3
P10809_1097
310.0
Memory CD4 T-cell nTPM: 189.3
Samples: 6
Max nTPM: 303.2
Min nTPM: 100.0
P10809_1014
171.9
P10809_1026
100.0
P10809_1045
118.4
P10809_1064
229.0
P10809_1086
213.1
P10809_1113
303.2
Memory CD8 T-cell nTPM: 209.0
Samples: 5
Max nTPM: 352.3
Min nTPM: 90.3
P10809_1012
159.1
P10809_1027
155.8
P10809_1046
90.3
P10809_1065
287.3
P10809_1111
352.3
Naive CD4 T-cell nTPM: 105.7
Samples: 6
Max nTPM: 133.4
Min nTPM: 75.7
P10809_1015
110.8
P10809_1030
75.7
P10809_1049
96.9
P10809_1068
97.5
P10809_1085
120.1
P10809_1112
133.4
Naive CD8 T-cell nTPM: 171.5
Samples: 6
Max nTPM: 283.9
Min nTPM: 105.0
P10809_1016
105.0
P10809_1031
129.3
P10809_1050
146.4
P10809_1069
206.5
P10809_1087
283.9
P10809_1110
157.7
T-reg nTPM: 253.2
Samples: 6
Max nTPM: 447.7
Min nTPM: 182.3
P10809_1018
266.8
P10809_1037
182.5
P10809_1056
182.3
P10809_1075
215.7
P10809_1094
223.9
P10809_1106
447.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
692.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 443.0
Samples: 4
Max nTPM: 525.0
Min nTPM: 338.5
RHH5202_R3573
513.3
RHH5230_R3602
338.5
RHH5259_R3631
395.3
RHH5288_R3660
525.0
Effector memory CD8 T-cell nTPM: 692.9
Samples: 4
Max nTPM: 793.9
Min nTPM: 615.6
RHH5203_R3574
793.9
RHH5231_R3603
615.6
RHH5260_R3632
638.5
RHH5289_R3661
723.5
MAIT T-cell nTPM: 548.9
Samples: 4
Max nTPM: 686.4
Min nTPM: 470.3
RHH5233_R3605
474.5
RHH5205_R3576
470.3
RHH5262_R3634
686.4
RHH5297_R3663
564.5
Memory CD4 T-cell TFH nTPM: 484.7
Samples: 4
Max nTPM: 539.3
Min nTPM: 431.5
RHH5300_R3666
469.4
RHH5236_R3608
431.5
RHH5265_R3637
498.7
RHH5208_R3579
539.3
Memory CD4 T-cell Th1 nTPM: 419.7
Samples: 4
Max nTPM: 534.5
Min nTPM: 281.7
RHH5210_R3581
404.2
RHH5302_R3668
534.5
RHH5238_R3610
281.7
RHH5267_R3639
458.5
Memory CD4 T-cell Th1/Th17 nTPM: 482.2
Samples: 4
Max nTPM: 585.4
Min nTPM: 343.0
RHH5303_R3669
585.4
RHH5211_R3582
548.2
RHH5239_R3611
343.0
RHH5268_R3640
452.3
Memory CD4 T-cell Th17 nTPM: 495.2
Samples: 4
Max nTPM: 539.1
Min nTPM: 442.0
RHH5304_R3670
514.8
RHH5212_R3583
539.1
RHH5240_R3612
484.7
RHH5269_R3641
442.0
Memory CD4 T-cell Th2 nTPM: 458.9
Samples: 4
Max nTPM: 535.3
Min nTPM: 378.0
RHH5305_R3671
427.3
RHH5213_R3584
535.3
RHH5241_R3613
378.0
RHH5270_R3642
495.0
Naive CD4 T-cell nTPM: 296.7
Samples: 4
Max nTPM: 339.5
Min nTPM: 257.2
RHH5306_R3672
293.0
RHH5214_R3585
339.5
RHH5242_R3614
257.2
RHH5271_R3643
297.1
Naive CD8 T-cell nTPM: 317.4
Samples: 4
Max nTPM: 391.6
Min nTPM: 233.8
RHH5201_R3572
391.6
RHH5229_R3601
233.8
RHH5258_R3630
353.9
RHH5287_R3659
290.1
Non-Vd2 gdTCR nTPM: 625.9
Samples: 4
Max nTPM: 829.6
Min nTPM: 422.7
RHH5235_R3607
422.7
RHH5264_R3636
829.6
RHH5207_R3578
615.8
RHH5299_R3665
635.3
T-reg nTPM: 459.4
Samples: 4
Max nTPM: 503.1
Min nTPM: 430.8
RHH5301_R3667
467.8
RHH5237_R3609
503.1
RHH5266_R3638
430.8
RHH5209_R3580
435.7
Terminal effector memory CD4 T-cell nTPM: 564.7
Samples: 2
Max nTPM: 647.9
Min nTPM: 481.4
RHH5243_R3615
481.4
RHH5272_R3644
647.9
Terminal effector memory CD8 T-cell nTPM: 610.6
Samples: 4
Max nTPM: 670.6
Min nTPM: 519.3
RHH5232_R3604
519.3
RHH5204_R3575
589.9
RHH5261_R3633
662.5
RHH5296_R3662
670.6
Vd2 gdTCR nTPM: 533.5
Samples: 4
Max nTPM: 630.4
Min nTPM: 415.4
RHH5234_R3606
415.4
RHH5206_R3577
630.4
RHH5263_R3635
573.3
RHH5298_R3664
515.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.