HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:8.8 nTPM
HPA Brain:18.4 nTPM
GTEx:8.8 nTPM
FANTOM5:11.6 Scaled Tags Per Million
Pig:24.3 nTPM
Mouse:17.0 nTPM
Allen mouse:4.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027242Antibody HPA027328
Glial cells Not detectedNot detected
Neuronal cells LowNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.4
Sample id Sample description nTPM
Hippocampus
nTPM: 17.6
1911 Female, age 85, right hemisphere 20.9
2529 Female, age 94, left hemisphere 20.2
2148 Female, age 91, left hemisphere 16.9
1898 Male, age 80, left hemisphere 16.3
1855 Male, age 76, left hemisphere 16.2
2621 Female, age 67, right hemisphere 15.2
Dentate gyrus
nTPM: 17.2
1927 Female, age 91, both hemispheres 18.5
2530 Female, age 94, left hemisphere 17.7
2246 Female, age 85, both hemispheres 17.4
2528 Male, age 74, both hemispheres 16.8
2531 Female, age 67, both hemispheres 16.4
2010 Male, age 76, both hemispheres 16.3
Entorhinal gyrus
nTPM: 16.0
2686 Male, age 75, right hemisphere 18.6
2117 Female, age 91, right hemisphere 17.8
2764 Male, age 80, right hemisphere 15.6
1938 Female, age 85, left hemisphere 15.2
1787 Male, age 76, left hemisphere 14.6
2613 Female, age 94, left hemisphere 14.5
Hippocampus, CA1
nTPM: 17.7
2082 Female, age 91, right hemisphere 20.1
2527 Male, age 74, both hemispheres 19.2
1873 Female, age 85, both hemispheres 18.4
2749 Male, age 80, left hemisphere 17.0
2045 Male, age 76, both hemispheres 13.7
Hippocampus, CA2
nTPM: 18.2
1963 Male, age 80, left hemisphere 21.0
2113 Female, age 91, right hemisphere 20.5
2249 Male, age 74, both hemispheres 19.6
1940 Female, age 85, left hemisphere 18.1
2437 Female, age 94, left hemisphere 15.6
1892 Male, age 76, both hemispheres 14.3
Hippocampus, CA3
nTPM: 18.2
2436 Male, age 74, both hemispheres 22.5
2137 Male, age 80, left hemisphere 20.3
1891 Female, age 85, both hemispheres 19.7
2620 Female, age 94, left hemisphere 16.9
1867 Male, age 76, both hemispheres 16.1
2861 Female, age 67, both hemispheres 13.7
Parahippocampal cortex
nTPM: 16.3
2018 Male, age 76, both hemispheres 18.2
2693 Female, age 94, both hemispheres 17.5
2250 Female, age 67, right hemisphere 17.3
1990 Female, age 91, right hemisphere 16.9
2245 Female, age 91, both hemispheres 16.6
1850 Male, age 80, both hemispheres 16.4
1933 Female, age 85, both hemispheres 16.4
2692 Male, age 74, both hemispheres 16.3
2532 Female, age 72, left hemisphere 13.6
2622 Female, age 67, right hemisphere 13.5
Perirhinal gyrus
nTPM: 15.5
2848 Male, age 76, right hemisphere 17.4
1847 Female, age 91, left hemisphere 15.5
2521 Female, age 94, right hemisphere 15.2
1841 Female, age 85, right hemisphere 14.9
1794 Male, age 80, right hemisphere 14.3
Subiculum
nTPM: 18.4
2042 Male, age 76, both hemispheres 21.6
2729 Female, age 91, right hemisphere 20.7
1901 Male, age 80, both hemispheres 18.7
2619 Male, age 74, both hemispheres 17.5
1977 Female, age 85, both hemispheres 16.8
2438 Female, age 94, left hemisphere 14.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 8.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.8
Samples: 197

Max nTPM: 19.1
Min nTPM: 3.3
Std nTPM: 2.2
Median nTPM: 8.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 19.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 18.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 15.4
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 15.0
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 14.9
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 14.0
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 13.2
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 13.2
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 13.2
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 13.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 12.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.6
FF:10153-102I9 76 years, female 13.9
FF:10169-103B7 60 years, female 9.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.3
Pig sample Sample description nTPM
Subiculum
nTPM: 21.7
Samples: 4

Max nTPM: 25.2
Min nTPM: 19.2
Sample A Female 25.2
Sample B Female 21.8
Sample C Male 19.2
Sample D Male 20.7
Dorsal hippocampus
nTPM: 24.3
Samples: 4

Max nTPM: 27.3
Min nTPM: 21.8
Sample A Female 27.3
Sample B Female 26.2
Sample C Male 21.8
Sample D Male 21.9
Entorhinal cortex
nTPM: 19.8
Samples: 4

Max nTPM: 23.1
Min nTPM: 16.4
Sample A Female 16.4
Sample B Female 23.1
Sample C Male 20.9
Sample D Male 18.6
Ventral hippocampus
nTPM: 22.6
Samples: 4

Max nTPM: 23.6
Min nTPM: 20.7
Sample A Female 23.1
Sample B Female 20.7
Sample C Male 23.1
Sample D Male 23.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.6
Samples: 4

Max nTPM: 16.3
Min nTPM: 14.3
Sample A Male 14.3
Sample B Male 15.5
Sample C Female 16.3
Sample D Female 16.1
Hippocampal formation
nTPM: 17.1
Samples: 4

Max nTPM: 18.2
Min nTPM: 15.7
Sample A Male 16.6
Sample B Male 18.2
Sample C Female 17.7
Sample D Female 15.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.0
68546013 Antisense, RP_050120_01_H08, Mouse strain C57BL/6J (56 days, male) 6.2
74819247 Antisense, RP_060315_02_C11, Mouse strain C57BL/6J (56 days, male) 1.7

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