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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
101.2
nTPM
Monaco:
104.5
nTPM
Schmiedel:
244.7
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
101.2
HPA sample
nTPM
gdT-cell nTPM: 94.6
Samples: 6
Max nTPM: 116.0
Min nTPM: 75.5
P10809_1007
75.5
P10809_1022
110.9
P10809_1041
116.0
P10809_1060
86.1
P10809_1077
83.2
P10809_1098
95.9
MAIT T-cell nTPM: 87.0
Samples: 6
Max nTPM: 111.9
Min nTPM: 67.5
P10809_1006
67.5
P10809_1024
93.4
P10809_1043
111.9
P10809_1062
101.8
P10809_1083
76.2
P10809_1097
71.2
Memory CD4 T-cell nTPM: 91.6
Samples: 6
Max nTPM: 114.9
Min nTPM: 75.3
P10809_1014
75.5
P10809_1026
114.9
P10809_1045
106.4
P10809_1064
75.3
P10809_1086
89.1
P10809_1113
88.1
Memory CD8 T-cell nTPM: 91.1
Samples: 5
Max nTPM: 104.8
Min nTPM: 80.9
P10809_1012
89.0
P10809_1027
99.1
P10809_1046
104.8
P10809_1065
81.5
P10809_1111
80.9
Naive CD4 T-cell nTPM: 83.5
Samples: 6
Max nTPM: 95.1
Min nTPM: 67.4
P10809_1015
67.4
P10809_1030
82.6
P10809_1049
95.1
P10809_1068
91.7
P10809_1085
80.5
P10809_1112
83.9
Naive CD8 T-cell nTPM: 86.8
Samples: 6
Max nTPM: 106.1
Min nTPM: 70.4
P10809_1016
74.8
P10809_1031
106.1
P10809_1050
88.4
P10809_1069
101.7
P10809_1087
70.4
P10809_1110
79.4
T-reg nTPM: 101.2
Samples: 6
Max nTPM: 124.9
Min nTPM: 81.7
P10809_1018
81.7
P10809_1037
90.4
P10809_1056
124.9
P10809_1075
91.0
P10809_1094
108.8
P10809_1106
110.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
104.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 94.3
Samples: 4
Max nTPM: 116.9
Min nTPM: 62.7
RHH5202_R3573
106.4
RHH5230_R3602
91.2
RHH5259_R3631
62.7
RHH5288_R3660
116.9
Effector memory CD8 T-cell nTPM: 82.0
Samples: 4
Max nTPM: 95.9
Min nTPM: 60.1
RHH5203_R3574
94.3
RHH5231_R3603
95.9
RHH5260_R3632
60.1
RHH5289_R3661
77.8
MAIT T-cell nTPM: 99.2
Samples: 4
Max nTPM: 143.2
Min nTPM: 62.1
RHH5233_R3605
62.1
RHH5205_R3576
71.1
RHH5262_R3634
120.2
RHH5297_R3663
143.2
Memory CD4 T-cell TFH nTPM: 99.7
Samples: 4
Max nTPM: 129.5
Min nTPM: 66.0
RHH5300_R3666
66.0
RHH5236_R3608
108.0
RHH5265_R3637
95.1
RHH5208_R3579
129.5
Memory CD4 T-cell Th1 nTPM: 92.1
Samples: 4
Max nTPM: 137.5
Min nTPM: 50.3
RHH5210_R3581
91.3
RHH5302_R3668
137.5
RHH5238_R3610
50.3
RHH5267_R3639
89.1
Memory CD4 T-cell Th1/Th17 nTPM: 93.3
Samples: 4
Max nTPM: 123.5
Min nTPM: 42.5
RHH5303_R3669
116.0
RHH5211_R3582
123.5
RHH5239_R3611
42.5
RHH5268_R3640
91.0
Memory CD4 T-cell Th17 nTPM: 104.5
Samples: 4
Max nTPM: 124.4
Min nTPM: 94.0
RHH5304_R3670
102.2
RHH5212_R3583
124.4
RHH5240_R3612
97.2
RHH5269_R3641
94.0
Memory CD4 T-cell Th2 nTPM: 100.7
Samples: 4
Max nTPM: 127.0
Min nTPM: 83.3
RHH5305_R3671
83.3
RHH5213_R3584
108.8
RHH5241_R3613
127.0
RHH5270_R3642
83.6
Naive CD4 T-cell nTPM: 88.2
Samples: 4
Max nTPM: 113.3
Min nTPM: 58.2
RHH5306_R3672
113.3
RHH5214_R3585
83.7
RHH5242_R3614
58.2
RHH5271_R3643
97.5
Naive CD8 T-cell nTPM: 85.4
Samples: 4
Max nTPM: 132.6
Min nTPM: 35.5
RHH5201_R3572
132.6
RHH5229_R3601
35.5
RHH5258_R3630
91.9
RHH5287_R3659
81.5
Non-Vd2 gdTCR nTPM: 64.6
Samples: 4
Max nTPM: 79.6
Min nTPM: 49.9
RHH5235_R3607
70.0
RHH5264_R3636
59.0
RHH5207_R3578
49.9
RHH5299_R3665
79.6
T-reg nTPM: 88.0
Samples: 4
Max nTPM: 95.8
Min nTPM: 75.5
RHH5301_R3667
90.3
RHH5237_R3609
95.8
RHH5266_R3638
75.5
RHH5209_R3580
90.3
Terminal effector memory CD4 T-cell nTPM: 82.9
Samples: 2
Max nTPM: 89.8
Min nTPM: 76.0
RHH5243_R3615
76.0
RHH5272_R3644
89.8
Terminal effector memory CD8 T-cell nTPM: 78.9
Samples: 4
Max nTPM: 103.6
Min nTPM: 59.1
RHH5232_R3604
86.3
RHH5204_R3575
66.6
RHH5261_R3633
59.1
RHH5296_R3662
103.6
Vd2 gdTCR nTPM: 89.7
Samples: 4
Max nTPM: 108.3
Min nTPM: 80.5
RHH5234_R3606
80.7
RHH5206_R3577
89.3
RHH5263_R3635
80.5
RHH5298_R3664
108.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
