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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
299.3
nTPM
Monaco:
26.6
nTPM
Schmiedel:
51.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
299.3
HPA sample
nTPM
gdT-cell nTPM: 172.7
Samples: 6
Max nTPM: 241.1
Min nTPM: 96.2
P10809_1007
96.2
P10809_1022
164.6
P10809_1041
241.1
P10809_1060
166.0
P10809_1077
174.5
P10809_1098
193.9
MAIT T-cell nTPM: 170.2
Samples: 6
Max nTPM: 213.1
Min nTPM: 93.6
P10809_1006
93.6
P10809_1024
189.2
P10809_1043
213.1
P10809_1062
183.8
P10809_1083
144.9
P10809_1097
196.6
Memory CD4 T-cell nTPM: 188.9
Samples: 6
Max nTPM: 234.3
Min nTPM: 109.0
P10809_1014
109.0
P10809_1026
234.3
P10809_1045
177.9
P10809_1064
221.1
P10809_1086
188.6
P10809_1113
202.4
Memory CD8 T-cell nTPM: 188.8
Samples: 5
Max nTPM: 247.7
Min nTPM: 97.7
P10809_1012
97.7
P10809_1027
247.7
P10809_1046
203.4
P10809_1065
186.4
P10809_1111
209.0
Naive CD4 T-cell nTPM: 143.1
Samples: 6
Max nTPM: 207.4
Min nTPM: 65.3
P10809_1015
65.3
P10809_1030
163.5
P10809_1049
207.4
P10809_1068
134.8
P10809_1085
140.6
P10809_1112
146.9
Naive CD8 T-cell nTPM: 153.3
Samples: 6
Max nTPM: 183.9
Min nTPM: 88.4
P10809_1016
88.4
P10809_1031
163.9
P10809_1050
183.9
P10809_1069
182.7
P10809_1087
178.4
P10809_1110
122.7
T-reg nTPM: 299.3
Samples: 6
Max nTPM: 470.7
Min nTPM: 154.4
P10809_1018
154.4
P10809_1037
293.5
P10809_1056
470.7
P10809_1075
341.4
P10809_1094
259.7
P10809_1106
275.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
26.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 19.7
Samples: 4
Max nTPM: 29.4
Min nTPM: 6.3
RHH5202_R3573
6.3
RHH5230_R3602
16.9
RHH5259_R3631
29.4
RHH5288_R3660
26.1
Effector memory CD8 T-cell nTPM: 15.6
Samples: 4
Max nTPM: 28.0
Min nTPM: 8.0
RHH5203_R3574
15.1
RHH5231_R3603
11.4
RHH5260_R3632
28.0
RHH5289_R3661
8.0
MAIT T-cell nTPM: 16.7
Samples: 4
Max nTPM: 20.6
Min nTPM: 13.7
RHH5233_R3605
13.7
RHH5205_R3576
16.4
RHH5262_R3634
20.6
RHH5297_R3663
16.0
Memory CD4 T-cell TFH nTPM: 15.2
Samples: 4
Max nTPM: 24.3
Min nTPM: 7.9
RHH5300_R3666
15.7
RHH5236_R3608
24.3
RHH5265_R3637
12.7
RHH5208_R3579
7.9
Memory CD4 T-cell Th1 nTPM: 21.5
Samples: 4
Max nTPM: 31.1
Min nTPM: 5.0
RHH5210_R3581
5.0
RHH5302_R3668
28.7
RHH5238_R3610
31.1
RHH5267_R3639
21.1
Memory CD4 T-cell Th1/Th17 nTPM: 20.9
Samples: 4
Max nTPM: 28.4
Min nTPM: 10.7
RHH5303_R3669
25.1
RHH5211_R3582
10.7
RHH5239_R3611
19.3
RHH5268_R3640
28.4
Memory CD4 T-cell Th17 nTPM: 17.5
Samples: 4
Max nTPM: 22.0
Min nTPM: 12.7
RHH5304_R3670
22.0
RHH5212_R3583
15.6
RHH5240_R3612
12.7
RHH5269_R3641
19.5
Memory CD4 T-cell Th2 nTPM: 18.1
Samples: 4
Max nTPM: 30.2
Min nTPM: 11.3
RHH5305_R3671
30.2
RHH5213_R3584
11.3
RHH5241_R3613
12.1
RHH5270_R3642
18.6
Naive CD4 T-cell nTPM: 16.0
Samples: 4
Max nTPM: 24.1
Min nTPM: 11.5
RHH5306_R3672
11.5
RHH5214_R3585
24.1
RHH5242_R3614
14.8
RHH5271_R3643
13.5
Naive CD8 T-cell nTPM: 11.6
Samples: 4
Max nTPM: 13.9
Min nTPM: 9.5
RHH5201_R3572
9.5
RHH5229_R3601
13.9
RHH5258_R3630
11.5
RHH5287_R3659
11.4
Non-Vd2 gdTCR nTPM: 19.1
Samples: 4
Max nTPM: 22.4
Min nTPM: 16.6
RHH5235_R3607
19.0
RHH5264_R3636
22.4
RHH5207_R3578
16.6
RHH5299_R3665
18.2
T-reg nTPM: 17.1
Samples: 4
Max nTPM: 21.5
Min nTPM: 12.7
RHH5301_R3667
12.7
RHH5237_R3609
21.5
RHH5266_R3638
18.3
RHH5209_R3580
15.8
Terminal effector memory CD4 T-cell nTPM: 19.8
Samples: 2
Max nTPM: 21.5
Min nTPM: 18.1
RHH5243_R3615
21.5
RHH5272_R3644
18.1
Terminal effector memory CD8 T-cell nTPM: 26.6
Samples: 4
Max nTPM: 55.2
Min nTPM: 8.9
RHH5232_R3604
8.9
RHH5204_R3575
55.2
RHH5261_R3633
30.2
RHH5296_R3662
12.1
Vd2 gdTCR nTPM: 24.3
Samples: 4
Max nTPM: 41.3
Min nTPM: 11.2
RHH5234_R3606
11.2
RHH5206_R3577
41.3
RHH5263_R3635
25.7
RHH5298_R3664
18.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
