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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
82.1
nTPM
Monaco:
87.5
nTPM
Schmiedel:
27.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
82.1
HPA sample
nTPM
gdT-cell nTPM: 82.1
Samples: 6
Max nTPM: 103.4
Min nTPM: 62.6
P10809_1007
62.6
P10809_1022
97.4
P10809_1041
87.0
P10809_1060
65.6
P10809_1077
103.4
P10809_1098
76.7
MAIT T-cell nTPM: 66.6
Samples: 6
Max nTPM: 94.7
Min nTPM: 51.1
P10809_1006
52.0
P10809_1024
54.3
P10809_1043
80.8
P10809_1062
66.4
P10809_1083
51.1
P10809_1097
94.7
Memory CD4 T-cell nTPM: 55.2
Samples: 6
Max nTPM: 77.9
Min nTPM: 37.1
P10809_1014
37.1
P10809_1026
77.9
P10809_1045
53.8
P10809_1064
58.2
P10809_1086
56.3
P10809_1113
47.8
Memory CD8 T-cell nTPM: 64.6
Samples: 5
Max nTPM: 84.1
Min nTPM: 48.6
P10809_1012
48.6
P10809_1027
84.1
P10809_1046
80.1
P10809_1065
50.3
P10809_1111
59.7
Naive CD4 T-cell nTPM: 37.0
Samples: 6
Max nTPM: 47.4
Min nTPM: 22.5
P10809_1015
22.5
P10809_1030
38.3
P10809_1049
47.4
P10809_1068
40.4
P10809_1085
41.5
P10809_1112
31.9
Naive CD8 T-cell nTPM: 54.8
Samples: 6
Max nTPM: 70.1
Min nTPM: 31.2
P10809_1016
32.9
P10809_1031
68.9
P10809_1050
55.8
P10809_1069
70.1
P10809_1087
69.6
P10809_1110
31.2
T-reg nTPM: 69.9
Samples: 6
Max nTPM: 84.5
Min nTPM: 54.4
P10809_1018
54.4
P10809_1037
84.5
P10809_1056
65.3
P10809_1075
84.5
P10809_1094
65.5
P10809_1106
65.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
87.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 35.9
Samples: 4
Max nTPM: 58.0
Min nTPM: 25.1
RHH5202_R3573
25.1
RHH5230_R3602
30.4
RHH5259_R3631
29.9
RHH5288_R3660
58.0
Effector memory CD8 T-cell nTPM: 52.3
Samples: 4
Max nTPM: 68.3
Min nTPM: 33.9
RHH5203_R3574
67.9
RHH5231_R3603
68.3
RHH5260_R3632
33.9
RHH5289_R3661
39.0
MAIT T-cell nTPM: 55.3
Samples: 4
Max nTPM: 77.9
Min nTPM: 37.4
RHH5233_R3605
59.9
RHH5205_R3576
37.4
RHH5262_R3634
46.0
RHH5297_R3663
77.9
Memory CD4 T-cell TFH nTPM: 43.8
Samples: 4
Max nTPM: 56.1
Min nTPM: 31.6
RHH5300_R3666
54.9
RHH5236_R3608
56.1
RHH5265_R3637
32.4
RHH5208_R3579
31.6
Memory CD4 T-cell Th1 nTPM: 44.0
Samples: 4
Max nTPM: 66.0
Min nTPM: 27.9
RHH5210_R3581
45.3
RHH5302_R3668
66.0
RHH5238_R3610
36.6
RHH5267_R3639
27.9
Memory CD4 T-cell Th1/Th17 nTPM: 39.3
Samples: 4
Max nTPM: 63.9
Min nTPM: 19.5
RHH5303_R3669
37.8
RHH5211_R3582
63.9
RHH5239_R3611
19.5
RHH5268_R3640
35.9
Memory CD4 T-cell Th17 nTPM: 33.0
Samples: 4
Max nTPM: 59.4
Min nTPM: 21.3
RHH5304_R3670
21.3
RHH5212_R3583
59.4
RHH5240_R3612
26.2
RHH5269_R3641
25.0
Memory CD4 T-cell Th2 nTPM: 36.5
Samples: 4
Max nTPM: 42.3
Min nTPM: 30.7
RHH5305_R3671
30.7
RHH5213_R3584
40.9
RHH5241_R3613
42.3
RHH5270_R3642
32.1
Naive CD4 T-cell nTPM: 37.1
Samples: 4
Max nTPM: 63.6
Min nTPM: 19.2
RHH5306_R3672
44.1
RHH5214_R3585
63.6
RHH5242_R3614
21.3
RHH5271_R3643
19.2
Naive CD8 T-cell nTPM: 27.8
Samples: 4
Max nTPM: 42.2
Min nTPM: 20.2
RHH5201_R3572
22.9
RHH5229_R3601
25.9
RHH5258_R3630
42.2
RHH5287_R3659
20.2
Non-Vd2 gdTCR nTPM: 87.5
Samples: 4
Max nTPM: 150.0
Min nTPM: 50.8
RHH5235_R3607
50.8
RHH5264_R3636
83.6
RHH5207_R3578
65.5
RHH5299_R3665
150.0
T-reg nTPM: 45.0
Samples: 4
Max nTPM: 73.6
Min nTPM: 22.0
RHH5301_R3667
41.8
RHH5237_R3609
73.6
RHH5266_R3638
22.0
RHH5209_R3580
42.7
Terminal effector memory CD4 T-cell nTPM: 51.1
Samples: 2
Max nTPM: 69.1
Min nTPM: 33.1
RHH5243_R3615
33.1
RHH5272_R3644
69.1
Terminal effector memory CD8 T-cell nTPM: 68.6
Samples: 4
Max nTPM: 110.0
Min nTPM: 39.2
RHH5232_R3604
67.7
RHH5204_R3575
110.0
RHH5261_R3633
39.2
RHH5296_R3662
57.6
Vd2 gdTCR nTPM: 75.9
Samples: 4
Max nTPM: 112.9
Min nTPM: 32.2
RHH5234_R3606
45.9
RHH5206_R3577
112.6
RHH5263_R3635
32.2
RHH5298_R3664
112.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
