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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
32.2
nTPM
Monaco:
634.4
nTPM
Schmiedel:
323.2
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
32.2
HPA sample
nTPM
gdT-cell nTPM: 14.3
Samples: 6
Max nTPM: 24.1
Min nTPM: 9.3
P10809_1007
10.1
P10809_1022
24.1
P10809_1041
15.2
P10809_1060
13.6
P10809_1077
13.6
P10809_1098
9.3
MAIT T-cell nTPM: 32.2
Samples: 6
Max nTPM: 38.8
Min nTPM: 21.2
P10809_1006
31.0
P10809_1024
38.8
P10809_1043
30.7
P10809_1062
37.9
P10809_1083
33.5
P10809_1097
21.2
Memory CD4 T-cell nTPM: 10.3
Samples: 6
Max nTPM: 15.7
Min nTPM: 5.7
P10809_1014
10.0
P10809_1026
12.8
P10809_1045
5.7
P10809_1064
9.1
P10809_1086
15.7
P10809_1113
8.2
Memory CD8 T-cell nTPM: 10.4
Samples: 5
Max nTPM: 14.1
Min nTPM: 6.2
P10809_1012
14.1
P10809_1027
6.2
P10809_1046
11.9
P10809_1065
12.3
P10809_1111
7.5
Naive CD4 T-cell nTPM: 5.3
Samples: 6
Max nTPM: 11.9
Min nTPM: 2.6
P10809_1015
4.9
P10809_1030
4.3
P10809_1049
2.8
P10809_1068
5.1
P10809_1085
11.9
P10809_1112
2.6
Naive CD8 T-cell nTPM: 6.6
Samples: 6
Max nTPM: 15.2
Min nTPM: 3.1
P10809_1016
4.6
P10809_1031
3.1
P10809_1050
3.2
P10809_1069
8.8
P10809_1087
15.2
P10809_1110
4.9
T-reg nTPM: 6.7
Samples: 6
Max nTPM: 9.7
Min nTPM: 4.9
P10809_1018
8.2
P10809_1037
5.3
P10809_1056
4.9
P10809_1075
9.7
P10809_1094
6.9
P10809_1106
5.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
634.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 155.9
Samples: 4
Max nTPM: 312.1
Min nTPM: 70.8
RHH5202_R3573
312.1
RHH5230_R3602
70.8
RHH5259_R3631
82.8
RHH5288_R3660
158.0
Effector memory CD8 T-cell nTPM: 298.7
Samples: 4
Max nTPM: 572.3
Min nTPM: 133.7
RHH5203_R3574
572.3
RHH5231_R3603
257.2
RHH5260_R3632
133.7
RHH5289_R3661
231.4
MAIT T-cell nTPM: 634.4
Samples: 4
Max nTPM: 781.7
Min nTPM: 492.8
RHH5233_R3605
781.7
RHH5205_R3576
745.0
RHH5262_R3634
492.8
RHH5297_R3663
518.2
Memory CD4 T-cell TFH nTPM: 90.8
Samples: 4
Max nTPM: 160.2
Min nTPM: 45.9
RHH5300_R3666
84.9
RHH5236_R3608
45.9
RHH5265_R3637
72.1
RHH5208_R3579
160.2
Memory CD4 T-cell Th1 nTPM: 92.0
Samples: 4
Max nTPM: 151.5
Min nTPM: 49.6
RHH5210_R3581
151.5
RHH5302_R3668
86.9
RHH5238_R3610
49.6
RHH5267_R3639
80.1
Memory CD4 T-cell Th1/Th17 nTPM: 192.6
Samples: 4
Max nTPM: 429.7
Min nTPM: 52.6
RHH5303_R3669
186.4
RHH5211_R3582
429.7
RHH5239_R3611
52.6
RHH5268_R3640
101.7
Memory CD4 T-cell Th17 nTPM: 154.0
Samples: 4
Max nTPM: 256.8
Min nTPM: 88.7
RHH5304_R3670
174.7
RHH5212_R3583
256.8
RHH5240_R3612
95.9
RHH5269_R3641
88.7
Memory CD4 T-cell Th2 nTPM: 99.2
Samples: 4
Max nTPM: 171.2
Min nTPM: 66.5
RHH5305_R3671
77.8
RHH5213_R3584
171.2
RHH5241_R3613
66.5
RHH5270_R3642
81.1
Naive CD4 T-cell nTPM: 44.6
Samples: 4
Max nTPM: 76.0
Min nTPM: 28.1
RHH5306_R3672
31.2
RHH5214_R3585
76.0
RHH5242_R3614
28.1
RHH5271_R3643
43.2
Naive CD8 T-cell nTPM: 47.4
Samples: 4
Max nTPM: 73.0
Min nTPM: 29.0
RHH5201_R3572
73.0
RHH5229_R3601
29.0
RHH5258_R3630
43.5
RHH5287_R3659
44.1
Non-Vd2 gdTCR nTPM: 409.9
Samples: 4
Max nTPM: 772.3
Min nTPM: 255.0
RHH5235_R3607
255.0
RHH5264_R3636
291.5
RHH5207_R3578
772.3
RHH5299_R3665
320.9
T-reg nTPM: 116.1
Samples: 4
Max nTPM: 160.1
Min nTPM: 97.4
RHH5301_R3667
108.1
RHH5237_R3609
97.4
RHH5266_R3638
98.8
RHH5209_R3580
160.1
Terminal effector memory CD4 T-cell nTPM: 82.3
Samples: 2
Max nTPM: 135.9
Min nTPM: 28.6
RHH5243_R3615
28.6
RHH5272_R3644
135.9
Terminal effector memory CD8 T-cell nTPM: 255.4
Samples: 4
Max nTPM: 497.3
Min nTPM: 120.7
RHH5232_R3604
168.6
RHH5204_R3575
497.3
RHH5261_R3633
120.7
RHH5296_R3662
235.0
Vd2 gdTCR nTPM: 449.4
Samples: 4
Max nTPM: 1001.9
Min nTPM: 225.0
RHH5234_R3606
330.0
RHH5206_R3577
1001.9
RHH5263_R3635
225.0
RHH5298_R3664
240.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
