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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
79.0
nTPM
Monaco:
157.9
nTPM
Schmiedel:
230.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
79.0
HPA sample
nTPM
gdT-cell nTPM: 56.2
Samples: 6
Max nTPM: 64.8
Min nTPM: 43.6
P10809_1007
43.6
P10809_1022
58.0
P10809_1041
51.7
P10809_1060
56.8
P10809_1077
62.0
P10809_1098
64.8
MAIT T-cell nTPM: 79.0
Samples: 6
Max nTPM: 97.9
Min nTPM: 54.7
P10809_1006
54.7
P10809_1024
96.1
P10809_1043
60.0
P10809_1062
71.2
P10809_1083
94.3
P10809_1097
97.9
Memory CD4 T-cell nTPM: 71.8
Samples: 6
Max nTPM: 89.2
Min nTPM: 56.1
P10809_1014
56.1
P10809_1026
69.4
P10809_1045
64.8
P10809_1064
72.8
P10809_1086
89.2
P10809_1113
78.6
Memory CD8 T-cell nTPM: 70.6
Samples: 5
Max nTPM: 96.0
Min nTPM: 47.9
P10809_1012
47.9
P10809_1027
66.4
P10809_1046
63.3
P10809_1065
79.5
P10809_1111
96.0
Naive CD4 T-cell nTPM: 74.0
Samples: 6
Max nTPM: 79.9
Min nTPM: 60.1
P10809_1015
60.1
P10809_1030
77.5
P10809_1049
78.4
P10809_1068
79.9
P10809_1085
78.6
P10809_1112
69.6
Naive CD8 T-cell nTPM: 72.1
Samples: 6
Max nTPM: 89.4
Min nTPM: 41.6
P10809_1016
41.6
P10809_1031
86.9
P10809_1050
64.9
P10809_1069
76.1
P10809_1087
89.4
P10809_1110
73.7
T-reg nTPM: 77.8
Samples: 6
Max nTPM: 100.0
Min nTPM: 54.5
P10809_1018
64.5
P10809_1037
93.5
P10809_1056
54.5
P10809_1075
68.5
P10809_1094
85.6
P10809_1106
100.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
157.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 111.3
Samples: 4
Max nTPM: 161.9
Min nTPM: 65.9
RHH5202_R3573
161.9
RHH5230_R3602
99.0
RHH5259_R3631
65.9
RHH5288_R3660
118.5
Effector memory CD8 T-cell nTPM: 116.1
Samples: 4
Max nTPM: 168.3
Min nTPM: 71.5
RHH5203_R3574
168.3
RHH5231_R3603
112.6
RHH5260_R3632
71.5
RHH5289_R3661
111.8
MAIT T-cell nTPM: 109.4
Samples: 4
Max nTPM: 122.9
Min nTPM: 101.7
RHH5233_R3605
122.9
RHH5205_R3576
101.7
RHH5262_R3634
104.0
RHH5297_R3663
109.0
Memory CD4 T-cell TFH nTPM: 157.9
Samples: 4
Max nTPM: 209.1
Min nTPM: 110.6
RHH5300_R3666
110.6
RHH5236_R3608
209.1
RHH5265_R3637
113.0
RHH5208_R3579
198.8
Memory CD4 T-cell Th1 nTPM: 107.2
Samples: 4
Max nTPM: 159.5
Min nTPM: 75.4
RHH5210_R3581
159.5
RHH5302_R3668
112.1
RHH5238_R3610
75.4
RHH5267_R3639
81.9
Memory CD4 T-cell Th1/Th17 nTPM: 115.4
Samples: 4
Max nTPM: 174.9
Min nTPM: 71.3
RHH5303_R3669
131.8
RHH5211_R3582
174.9
RHH5239_R3611
83.5
RHH5268_R3640
71.3
Memory CD4 T-cell Th17 nTPM: 103.3
Samples: 4
Max nTPM: 173.8
Min nTPM: 67.9
RHH5304_R3670
91.8
RHH5212_R3583
173.8
RHH5240_R3612
67.9
RHH5269_R3641
79.8
Memory CD4 T-cell Th2 nTPM: 122.1
Samples: 4
Max nTPM: 165.1
Min nTPM: 89.9
RHH5305_R3671
112.9
RHH5213_R3584
165.1
RHH5241_R3613
120.6
RHH5270_R3642
89.9
Naive CD4 T-cell nTPM: 106.1
Samples: 4
Max nTPM: 181.1
Min nTPM: 73.5
RHH5306_R3672
78.9
RHH5214_R3585
181.1
RHH5242_R3614
90.9
RHH5271_R3643
73.5
Naive CD8 T-cell nTPM: 108.5
Samples: 4
Max nTPM: 167.0
Min nTPM: 63.1
RHH5201_R3572
167.0
RHH5229_R3601
63.1
RHH5258_R3630
114.5
RHH5287_R3659
89.4
Non-Vd2 gdTCR nTPM: 99.0
Samples: 4
Max nTPM: 126.8
Min nTPM: 66.1
RHH5235_R3607
66.1
RHH5264_R3636
122.8
RHH5207_R3578
126.8
RHH5299_R3665
80.3
T-reg nTPM: 137.6
Samples: 4
Max nTPM: 179.0
Min nTPM: 79.0
RHH5301_R3667
117.2
RHH5237_R3609
179.0
RHH5266_R3638
79.0
RHH5209_R3580
175.3
Terminal effector memory CD4 T-cell nTPM: 80.6
Samples: 2
Max nTPM: 99.3
Min nTPM: 61.9
RHH5243_R3615
61.9
RHH5272_R3644
99.3
Terminal effector memory CD8 T-cell nTPM: 106.0
Samples: 4
Max nTPM: 162.2
Min nTPM: 60.1
RHH5232_R3604
115.8
RHH5204_R3575
162.2
RHH5261_R3633
60.1
RHH5296_R3662
85.9
Vd2 gdTCR nTPM: 102.4
Samples: 4
Max nTPM: 125.1
Min nTPM: 84.6
RHH5234_R3606
99.5
RHH5206_R3577
125.1
RHH5263_R3635
84.6
RHH5298_R3664
100.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
