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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
68.7
nTPM
Monaco:
65.7
nTPM
Schmiedel:
499.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
68.7
HPA sample
nTPM
gdT-cell nTPM: 52.6
Samples: 6
Max nTPM: 62.0
Min nTPM: 46.1
P10809_1007
48.2
P10809_1022
54.0
P10809_1041
46.1
P10809_1060
62.0
P10809_1077
56.4
P10809_1098
48.8
MAIT T-cell nTPM: 62.9
Samples: 6
Max nTPM: 89.0
Min nTPM: 46.4
P10809_1006
46.4
P10809_1024
89.0
P10809_1043
50.5
P10809_1062
63.7
P10809_1083
69.9
P10809_1097
57.8
Memory CD4 T-cell nTPM: 55.7
Samples: 6
Max nTPM: 70.2
Min nTPM: 47.1
P10809_1014
47.1
P10809_1026
70.2
P10809_1045
49.2
P10809_1064
58.2
P10809_1086
61.1
P10809_1113
48.3
Memory CD8 T-cell nTPM: 55.2
Samples: 5
Max nTPM: 66.3
Min nTPM: 41.1
P10809_1012
41.1
P10809_1027
62.3
P10809_1046
51.8
P10809_1065
66.3
P10809_1111
54.5
Naive CD4 T-cell nTPM: 60.1
Samples: 6
Max nTPM: 74.9
Min nTPM: 43.1
P10809_1015
43.1
P10809_1030
74.9
P10809_1049
58.9
P10809_1068
67.9
P10809_1085
66.8
P10809_1112
48.7
Naive CD8 T-cell nTPM: 56.0
Samples: 6
Max nTPM: 74.0
Min nTPM: 44.0
P10809_1016
47.5
P10809_1031
74.0
P10809_1050
44.0
P10809_1069
66.5
P10809_1087
57.6
P10809_1110
46.6
T-reg nTPM: 68.7
Samples: 6
Max nTPM: 83.8
Min nTPM: 51.6
P10809_1018
51.6
P10809_1037
83.3
P10809_1056
60.7
P10809_1075
83.8
P10809_1094
62.3
P10809_1106
70.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
65.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 36.0
Samples: 4
Max nTPM: 43.0
Min nTPM: 28.6
RHH5202_R3573
28.6
RHH5230_R3602
39.3
RHH5259_R3631
43.0
RHH5288_R3660
33.1
Effector memory CD8 T-cell nTPM: 65.2
Samples: 4
Max nTPM: 78.4
Min nTPM: 44.1
RHH5203_R3574
44.1
RHH5231_R3603
64.6
RHH5260_R3632
78.4
RHH5289_R3661
73.7
MAIT T-cell nTPM: 55.7
Samples: 4
Max nTPM: 77.0
Min nTPM: 46.4
RHH5233_R3605
50.1
RHH5205_R3576
49.1
RHH5262_R3634
77.0
RHH5297_R3663
46.4
Memory CD4 T-cell TFH nTPM: 65.7
Samples: 4
Max nTPM: 100.6
Min nTPM: 37.1
RHH5300_R3666
50.0
RHH5236_R3608
100.6
RHH5265_R3637
74.9
RHH5208_R3579
37.1
Memory CD4 T-cell Th1 nTPM: 39.6
Samples: 4
Max nTPM: 41.3
Min nTPM: 36.8
RHH5210_R3581
41.3
RHH5302_R3668
40.9
RHH5238_R3610
39.2
RHH5267_R3639
36.8
Memory CD4 T-cell Th1/Th17 nTPM: 55.6
Samples: 4
Max nTPM: 87.4
Min nTPM: 44.0
RHH5303_R3669
44.0
RHH5211_R3582
87.4
RHH5239_R3611
46.6
RHH5268_R3640
44.3
Memory CD4 T-cell Th17 nTPM: 51.0
Samples: 4
Max nTPM: 66.3
Min nTPM: 42.2
RHH5304_R3670
46.2
RHH5212_R3583
66.3
RHH5240_R3612
49.1
RHH5269_R3641
42.2
Memory CD4 T-cell Th2 nTPM: 53.3
Samples: 4
Max nTPM: 57.5
Min nTPM: 45.3
RHH5305_R3671
54.0
RHH5213_R3584
56.4
RHH5241_R3613
45.3
RHH5270_R3642
57.5
Naive CD4 T-cell nTPM: 50.7
Samples: 4
Max nTPM: 65.1
Min nTPM: 42.0
RHH5306_R3672
43.1
RHH5214_R3585
65.1
RHH5242_R3614
52.4
RHH5271_R3643
42.0
Naive CD8 T-cell nTPM: 56.5
Samples: 4
Max nTPM: 75.6
Min nTPM: 38.0
RHH5201_R3572
75.6
RHH5229_R3601
55.5
RHH5258_R3630
38.0
RHH5287_R3659
56.9
Non-Vd2 gdTCR nTPM: 59.5
Samples: 4
Max nTPM: 91.4
Min nTPM: 44.8
RHH5235_R3607
54.2
RHH5264_R3636
91.4
RHH5207_R3578
47.6
RHH5299_R3665
44.8
T-reg nTPM: 53.8
Samples: 4
Max nTPM: 63.5
Min nTPM: 39.3
RHH5301_R3667
39.3
RHH5237_R3609
63.5
RHH5266_R3638
60.0
RHH5209_R3580
52.2
Terminal effector memory CD4 T-cell nTPM: 32.0
Samples: 2
Max nTPM: 41.3
Min nTPM: 22.7
RHH5243_R3615
22.7
RHH5272_R3644
41.3
Terminal effector memory CD8 T-cell nTPM: 54.7
Samples: 4
Max nTPM: 62.3
Min nTPM: 42.2
RHH5232_R3604
60.0
RHH5204_R3575
54.3
RHH5261_R3633
62.3
RHH5296_R3662
42.2
Vd2 gdTCR nTPM: 53.1
Samples: 4
Max nTPM: 68.0
Min nTPM: 41.0
RHH5234_R3606
41.0
RHH5206_R3577
68.0
RHH5263_R3635
59.8
RHH5298_R3664
43.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
