HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:24.9 nTPM
HPA Brain:16.6 nTPM
GTEx:24.9 nTPM
FANTOM5:20.0 Scaled Tags Per Million
Pig:6.3 nTPM
Mouse:12.9 nTPM
Allen mouse:8.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005789
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.6
Sample id Sample description nTPM
Hippocampus
nTPM: 16.3
2529 Female, age 94, left hemisphere 19.5
2621 Female, age 67, right hemisphere 17.1
2148 Female, age 91, left hemisphere 17.0
1898 Male, age 80, left hemisphere 15.7
1911 Female, age 85, right hemisphere 15.1
1855 Male, age 76, left hemisphere 13.2
Dentate gyrus
nTPM: 15.9
2530 Female, age 94, left hemisphere 18.4
2531 Female, age 67, both hemispheres 18.0
2528 Male, age 74, both hemispheres 15.2
1927 Female, age 91, both hemispheres 14.9
2246 Female, age 85, both hemispheres 14.6
2010 Male, age 76, both hemispheres 14.5
Entorhinal gyrus
nTPM: 16.6
2117 Female, age 91, right hemisphere 18.6
2764 Male, age 80, right hemisphere 18.6
2613 Female, age 94, left hemisphere 18.0
2686 Male, age 75, right hemisphere 15.6
1787 Male, age 76, left hemisphere 15.3
1938 Female, age 85, left hemisphere 13.8
Hippocampus, CA1
nTPM: 15.6
2749 Male, age 80, left hemisphere 17.3
2527 Male, age 74, both hemispheres 16.4
2082 Female, age 91, right hemisphere 15.6
2045 Male, age 76, both hemispheres 14.7
1873 Female, age 85, both hemispheres 14.2
Hippocampus, CA2
nTPM: 16.4
1963 Male, age 80, left hemisphere 19.2
2437 Female, age 94, left hemisphere 18.3
2113 Female, age 91, right hemisphere 17.5
1940 Female, age 85, left hemisphere 15.6
2249 Male, age 74, both hemispheres 14.2
1892 Male, age 76, both hemispheres 13.5
Hippocampus, CA3
nTPM: 15.6
2861 Female, age 67, both hemispheres 17.4
2137 Male, age 80, left hemisphere 16.5
2620 Female, age 94, left hemisphere 15.6
1867 Male, age 76, both hemispheres 15.0
1891 Female, age 85, both hemispheres 15.0
2436 Male, age 74, both hemispheres 14.2
Parahippocampal cortex
nTPM: 15.3
2245 Female, age 91, both hemispheres 18.0
2692 Male, age 74, both hemispheres 16.6
2532 Female, age 72, left hemisphere 16.2
1990 Female, age 91, right hemisphere 15.9
1850 Male, age 80, both hemispheres 15.8
2622 Female, age 67, right hemisphere 15.4
2018 Male, age 76, both hemispheres 14.8
1933 Female, age 85, both hemispheres 13.8
2250 Female, age 67, right hemisphere 13.6
2693 Female, age 94, both hemispheres 13.0
Perirhinal gyrus
nTPM: 14.0
1794 Male, age 80, right hemisphere 14.5
1847 Female, age 91, left hemisphere 14.4
2521 Female, age 94, right hemisphere 14.3
1841 Female, age 85, right hemisphere 14.1
2848 Male, age 76, right hemisphere 13.0
Subiculum
nTPM: 16.3
2438 Female, age 94, left hemisphere 19.1
1901 Male, age 80, both hemispheres 16.6
2619 Male, age 74, both hemispheres 16.5
1977 Female, age 85, both hemispheres 15.9
2729 Female, age 91, right hemisphere 15.1
2042 Male, age 76, both hemispheres 14.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.9
Samples: 197

Max nTPM: 51.6
Min nTPM: 13.1
Std nTPM: 6.9
Median nTPM: 24.0
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 51.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 46.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 44.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 43.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 42.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 42.2
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 42.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 41.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 38.5
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 38.0
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 37.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.0
FF:10153-102I9 76 years, female 28.6
FF:10169-103B7 60 years, female 11.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 6.3
Pig sample Sample description nTPM
Subiculum
nTPM: 5.9
Samples: 4

Max nTPM: 6.6
Min nTPM: 5.4
Sample A Female 6.6
Sample B Female 5.6
Sample C Male 5.8
Sample D Male 5.4
Dorsal hippocampus
nTPM: 5.9
Samples: 4

Max nTPM: 6.1
Min nTPM: 5.7
Sample A Female 5.9
Sample B Female 5.7
Sample C Male 6.1
Sample D Male 5.7
Entorhinal cortex
nTPM: 5.8
Samples: 4

Max nTPM: 6.4
Min nTPM: 5.5
Sample A Female 5.7
Sample B Female 5.6
Sample C Male 6.4
Sample D Male 5.5
Ventral hippocampus
nTPM: 6.4
Samples: 4

Max nTPM: 7.9
Min nTPM: 5.0
Sample A Female 5.6
Sample B Female 5.0
Sample C Male 7.9
Sample D Male 6.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.9
Samples: 4

Max nTPM: 14.7
Min nTPM: 11.5
Sample A Male 13.3
Sample B Male 14.7
Sample C Female 12.0
Sample D Female 11.5
Hippocampal formation
nTPM: 11.9
Samples: 4

Max nTPM: 13.1
Min nTPM: 11.0
Sample A Male 11.2
Sample B Male 12.4
Sample C Female 11.0
Sample D Female 13.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.8
69290734 Antisense, RP_050407_04_F03, Mouse strain C57BL/6J (56 days, male) 8.8

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