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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
64.5
nTPM
Monaco:
221.0
nTPM
Schmiedel:
58.7
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
64.5
HPA sample
nTPM
gdT-cell nTPM: 37.4
Samples: 6
Max nTPM: 47.5
Min nTPM: 24.6
P10809_1007
24.6
P10809_1022
28.7
P10809_1041
41.3
P10809_1060
45.6
P10809_1077
47.5
P10809_1098
36.6
MAIT T-cell nTPM: 26.1
Samples: 6
Max nTPM: 33.5
Min nTPM: 19.7
P10809_1006
19.7
P10809_1024
24.8
P10809_1043
21.2
P10809_1062
30.9
P10809_1083
33.5
P10809_1097
26.6
Memory CD4 T-cell nTPM: 32.8
Samples: 6
Max nTPM: 53.7
Min nTPM: 19.7
P10809_1014
25.2
P10809_1026
19.7
P10809_1045
22.8
P10809_1064
44.5
P10809_1086
53.7
P10809_1113
30.9
Memory CD8 T-cell nTPM: 31.7
Samples: 5
Max nTPM: 48.4
Min nTPM: 21.3
P10809_1012
21.3
P10809_1027
31.6
P10809_1046
24.5
P10809_1065
48.4
P10809_1111
32.5
Naive CD4 T-cell nTPM: 4.2
Samples: 6
Max nTPM: 15.1
Min nTPM: 0.9
P10809_1015
2.5
P10809_1030
1.8
P10809_1049
0.9
P10809_1068
2.0
P10809_1085
15.1
P10809_1112
3.1
Naive CD8 T-cell nTPM: 18.3
Samples: 6
Max nTPM: 47.3
Min nTPM: 2.3
P10809_1016
2.3
P10809_1031
11.2
P10809_1050
11.5
P10809_1069
27.5
P10809_1087
47.3
P10809_1110
9.9
T-reg nTPM: 64.5
Samples: 6
Max nTPM: 96.3
Min nTPM: 38.3
P10809_1018
52.6
P10809_1037
69.3
P10809_1056
38.3
P10809_1075
70.0
P10809_1094
60.5
P10809_1106
96.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
221.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 87.3
Samples: 4
Max nTPM: 119.7
Min nTPM: 43.3
RHH5202_R3573
95.7
RHH5230_R3602
90.3
RHH5259_R3631
43.3
RHH5288_R3660
119.7
Effector memory CD8 T-cell nTPM: 171.0
Samples: 4
Max nTPM: 209.6
Min nTPM: 141.8
RHH5203_R3574
153.0
RHH5231_R3603
179.7
RHH5260_R3632
141.8
RHH5289_R3661
209.6
MAIT T-cell nTPM: 120.9
Samples: 4
Max nTPM: 146.7
Min nTPM: 96.0
RHH5233_R3605
146.7
RHH5205_R3576
96.0
RHH5262_R3634
110.2
RHH5297_R3663
130.6
Memory CD4 T-cell TFH nTPM: 101.1
Samples: 4
Max nTPM: 136.5
Min nTPM: 67.8
RHH5300_R3666
136.5
RHH5236_R3608
120.7
RHH5265_R3637
67.8
RHH5208_R3579
79.4
Memory CD4 T-cell Th1 nTPM: 91.8
Samples: 4
Max nTPM: 112.9
Min nTPM: 55.2
RHH5210_R3581
55.2
RHH5302_R3668
112.9
RHH5238_R3610
105.2
RHH5267_R3639
93.8
Memory CD4 T-cell Th1/Th17 nTPM: 154.8
Samples: 4
Max nTPM: 244.1
Min nTPM: 111.8
RHH5303_R3669
244.1
RHH5211_R3582
130.3
RHH5239_R3611
111.8
RHH5268_R3640
132.8
Memory CD4 T-cell Th17 nTPM: 127.8
Samples: 4
Max nTPM: 149.4
Min nTPM: 92.2
RHH5304_R3670
128.5
RHH5212_R3583
92.2
RHH5240_R3612
141.0
RHH5269_R3641
149.4
Memory CD4 T-cell Th2 nTPM: 136.7
Samples: 4
Max nTPM: 154.9
Min nTPM: 109.7
RHH5305_R3671
154.9
RHH5213_R3584
151.1
RHH5241_R3613
130.9
RHH5270_R3642
109.7
Naive CD4 T-cell nTPM: 7.8
Samples: 4
Max nTPM: 13.0
Min nTPM: 0.0
RHH5306_R3672
12.2
RHH5214_R3585
6.0
RHH5242_R3614
0.0
RHH5271_R3643
13.0
Naive CD8 T-cell nTPM: 2.4
Samples: 4
Max nTPM: 5.1
Min nTPM: 0.8
RHH5201_R3572
0.8
RHH5229_R3601
5.1
RHH5258_R3630
1.5
RHH5287_R3659
2.2
Non-Vd2 gdTCR nTPM: 221.0
Samples: 4
Max nTPM: 241.4
Min nTPM: 166.0
RHH5235_R3607
166.0
RHH5264_R3636
241.4
RHH5207_R3578
236.5
RHH5299_R3665
240.0
T-reg nTPM: 117.6
Samples: 4
Max nTPM: 161.0
Min nTPM: 84.4
RHH5301_R3667
161.0
RHH5237_R3609
138.1
RHH5266_R3638
86.7
RHH5209_R3580
84.4
Terminal effector memory CD4 T-cell nTPM: 213.3
Samples: 2
Max nTPM: 220.2
Min nTPM: 206.4
RHH5243_R3615
206.4
RHH5272_R3644
220.2
Terminal effector memory CD8 T-cell nTPM: 207.1
Samples: 4
Max nTPM: 234.9
Min nTPM: 177.5
RHH5232_R3604
234.9
RHH5204_R3575
199.1
RHH5261_R3633
177.5
RHH5296_R3662
216.9
Vd2 gdTCR nTPM: 162.1
Samples: 4
Max nTPM: 220.6
Min nTPM: 128.3
RHH5234_R3606
128.3
RHH5206_R3577
220.6
RHH5263_R3635
146.3
RHH5298_R3664
153.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
