We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
64.8
nTPM
Monaco:
51.8
nTPM
Schmiedel:
21.7
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
64.8
HPA sample
nTPM
gdT-cell nTPM: 45.8
Samples: 6
Max nTPM: 66.8
Min nTPM: 29.2
P10809_1007
29.2
P10809_1022
66.8
P10809_1041
49.3
P10809_1060
37.3
P10809_1077
37.6
P10809_1098
54.7
MAIT T-cell nTPM: 52.3
Samples: 6
Max nTPM: 84.7
Min nTPM: 26.4
P10809_1006
26.4
P10809_1024
84.7
P10809_1043
52.3
P10809_1062
45.5
P10809_1083
51.6
P10809_1097
53.3
Memory CD4 T-cell nTPM: 44.1
Samples: 6
Max nTPM: 52.1
Min nTPM: 32.0
P10809_1014
32.0
P10809_1026
52.1
P10809_1045
46.2
P10809_1064
36.3
P10809_1086
51.4
P10809_1113
46.6
Memory CD8 T-cell nTPM: 37.9
Samples: 5
Max nTPM: 48.7
Min nTPM: 26.2
P10809_1012
26.2
P10809_1027
48.7
P10809_1046
42.5
P10809_1065
32.6
P10809_1111
39.3
Naive CD4 T-cell nTPM: 64.8
Samples: 6
Max nTPM: 94.7
Min nTPM: 34.9
P10809_1015
34.9
P10809_1030
73.7
P10809_1049
94.7
P10809_1068
61.9
P10809_1085
68.0
P10809_1112
55.7
Naive CD8 T-cell nTPM: 42.8
Samples: 6
Max nTPM: 68.2
Min nTPM: 28.9
P10809_1016
28.9
P10809_1031
68.2
P10809_1050
33.6
P10809_1069
40.6
P10809_1087
41.7
P10809_1110
43.8
T-reg nTPM: 43.2
Samples: 6
Max nTPM: 61.2
Min nTPM: 20.5
P10809_1018
20.5
P10809_1037
61.2
P10809_1056
43.8
P10809_1075
29.6
P10809_1094
55.1
P10809_1106
48.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
51.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 40.8
Samples: 4
Max nTPM: 51.3
Min nTPM: 26.8
RHH5202_R3573
51.3
RHH5230_R3602
42.1
RHH5259_R3631
26.8
RHH5288_R3660
42.9
Effector memory CD8 T-cell nTPM: 29.5
Samples: 4
Max nTPM: 37.7
Min nTPM: 15.7
RHH5203_R3574
34.5
RHH5231_R3603
30.0
RHH5260_R3632
15.7
RHH5289_R3661
37.7
MAIT T-cell nTPM: 42.0
Samples: 4
Max nTPM: 49.0
Min nTPM: 33.3
RHH5233_R3605
45.2
RHH5205_R3576
40.4
RHH5262_R3634
49.0
RHH5297_R3663
33.3
Memory CD4 T-cell TFH nTPM: 41.8
Samples: 4
Max nTPM: 61.7
Min nTPM: 33.1
RHH5300_R3666
33.1
RHH5236_R3608
61.7
RHH5265_R3637
36.0
RHH5208_R3579
36.3
Memory CD4 T-cell Th1 nTPM: 42.9
Samples: 4
Max nTPM: 66.3
Min nTPM: 31.6
RHH5210_R3581
31.6
RHH5302_R3668
66.3
RHH5238_R3610
31.8
RHH5267_R3639
41.7
Memory CD4 T-cell Th1/Th17 nTPM: 34.6
Samples: 4
Max nTPM: 58.5
Min nTPM: 14.8
RHH5303_R3669
58.5
RHH5211_R3582
31.7
RHH5239_R3611
14.8
RHH5268_R3640
33.2
Memory CD4 T-cell Th17 nTPM: 31.3
Samples: 4
Max nTPM: 47.2
Min nTPM: 21.0
RHH5304_R3670
47.2
RHH5212_R3583
26.9
RHH5240_R3612
30.2
RHH5269_R3641
21.0
Memory CD4 T-cell Th2 nTPM: 41.8
Samples: 4
Max nTPM: 56.3
Min nTPM: 30.7
RHH5305_R3671
56.3
RHH5213_R3584
38.5
RHH5241_R3613
30.7
RHH5270_R3642
41.8
Naive CD4 T-cell nTPM: 46.6
Samples: 4
Max nTPM: 52.1
Min nTPM: 39.5
RHH5306_R3672
52.0
RHH5214_R3585
52.1
RHH5242_R3614
39.5
RHH5271_R3643
42.8
Naive CD8 T-cell nTPM: 51.8
Samples: 4
Max nTPM: 73.7
Min nTPM: 16.4
RHH5201_R3572
73.7
RHH5229_R3601
16.4
RHH5258_R3630
52.1
RHH5287_R3659
65.1
Non-Vd2 gdTCR nTPM: 31.1
Samples: 4
Max nTPM: 43.7
Min nTPM: 13.5
RHH5235_R3607
13.5
RHH5264_R3636
32.7
RHH5207_R3578
43.7
RHH5299_R3665
34.6
T-reg nTPM: 39.0
Samples: 4
Max nTPM: 44.5
Min nTPM: 33.7
RHH5301_R3667
44.5
RHH5237_R3609
41.9
RHH5266_R3638
33.7
RHH5209_R3580
35.9
Terminal effector memory CD4 T-cell nTPM: 35.8
Samples: 2
Max nTPM: 37.6
Min nTPM: 34.0
RHH5243_R3615
34.0
RHH5272_R3644
37.6
Terminal effector memory CD8 T-cell nTPM: 34.1
Samples: 4
Max nTPM: 54.6
Min nTPM: 15.3
RHH5232_R3604
41.6
RHH5204_R3575
24.9
RHH5261_R3633
15.3
RHH5296_R3662
54.6
Vd2 gdTCR nTPM: 45.6
Samples: 4
Max nTPM: 63.1
Min nTPM: 32.6
RHH5234_R3606
63.1
RHH5206_R3577
45.0
RHH5263_R3635
32.6
RHH5298_R3664
41.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
