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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
51.2
nTPM
Monaco:
149.2
nTPM
Schmiedel:
792.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
51.2
HPA sample
nTPM
gdT-cell nTPM: 8.2
Samples: 6
Max nTPM: 12.2
Min nTPM: 3.7
P10809_1007
5.7
P10809_1022
3.7
P10809_1041
9.4
P10809_1060
12.2
P10809_1077
6.4
P10809_1098
11.7
MAIT T-cell nTPM: 51.2
Samples: 6
Max nTPM: 71.7
Min nTPM: 37.3
P10809_1006
50.0
P10809_1024
71.7
P10809_1043
37.3
P10809_1062
53.9
P10809_1083
51.7
P10809_1097
42.3
Memory CD4 T-cell nTPM: 36.2
Samples: 6
Max nTPM: 46.8
Min nTPM: 31.1
P10809_1014
35.7
P10809_1026
34.4
P10809_1045
31.1
P10809_1064
36.7
P10809_1086
46.8
P10809_1113
32.6
Memory CD8 T-cell nTPM: 24.6
Samples: 5
Max nTPM: 31.9
Min nTPM: 16.3
P10809_1012
30.7
P10809_1027
16.3
P10809_1046
31.9
P10809_1065
20.7
P10809_1111
23.2
Naive CD4 T-cell nTPM: 12.3
Samples: 6
Max nTPM: 16.2
Min nTPM: 9.5
P10809_1015
11.9
P10809_1030
9.5
P10809_1049
10.7
P10809_1068
16.2
P10809_1085
11.9
P10809_1112
13.8
Naive CD8 T-cell nTPM: 3.3
Samples: 6
Max nTPM: 4.0
Min nTPM: 1.8
P10809_1016
4.0
P10809_1031
1.8
P10809_1050
3.8
P10809_1069
3.2
P10809_1087
3.6
P10809_1110
3.2
T-reg nTPM: 49.0
Samples: 6
Max nTPM: 72.2
Min nTPM: 34.2
P10809_1018
43.6
P10809_1037
34.2
P10809_1056
72.2
P10809_1075
43.9
P10809_1094
51.1
P10809_1106
48.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
149.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 55.8
Samples: 4
Max nTPM: 68.7
Min nTPM: 39.4
RHH5202_R3573
58.7
RHH5230_R3602
39.4
RHH5259_R3631
56.2
RHH5288_R3660
68.7
Effector memory CD8 T-cell nTPM: 58.3
Samples: 4
Max nTPM: 73.9
Min nTPM: 46.9
RHH5203_R3574
46.9
RHH5231_R3603
63.2
RHH5260_R3632
73.9
RHH5289_R3661
49.2
MAIT T-cell nTPM: 149.3
Samples: 4
Max nTPM: 170.7
Min nTPM: 137.4
RHH5233_R3605
170.7
RHH5205_R3576
147.4
RHH5262_R3634
137.4
RHH5297_R3663
141.5
Memory CD4 T-cell TFH nTPM: 72.6
Samples: 4
Max nTPM: 89.8
Min nTPM: 53.0
RHH5300_R3666
89.8
RHH5236_R3608
53.0
RHH5265_R3637
82.2
RHH5208_R3579
65.5
Memory CD4 T-cell Th1 nTPM: 67.2
Samples: 4
Max nTPM: 79.6
Min nTPM: 46.6
RHH5210_R3581
46.6
RHH5302_R3668
79.6
RHH5238_R3610
71.0
RHH5267_R3639
71.6
Memory CD4 T-cell Th1/Th17 nTPM: 96.7
Samples: 4
Max nTPM: 113.0
Min nTPM: 80.6
RHH5303_R3669
113.0
RHH5211_R3582
95.8
RHH5239_R3611
80.6
RHH5268_R3640
97.3
Memory CD4 T-cell Th17 nTPM: 90.6
Samples: 4
Max nTPM: 128.9
Min nTPM: 75.8
RHH5304_R3670
128.9
RHH5212_R3583
75.8
RHH5240_R3612
78.6
RHH5269_R3641
79.2
Memory CD4 T-cell Th2 nTPM: 55.2
Samples: 4
Max nTPM: 64.6
Min nTPM: 35.5
RHH5305_R3671
64.6
RHH5213_R3584
63.2
RHH5241_R3613
35.5
RHH5270_R3642
57.3
Naive CD4 T-cell nTPM: 25.5
Samples: 4
Max nTPM: 29.9
Min nTPM: 13.4
RHH5306_R3672
28.8
RHH5214_R3585
13.4
RHH5242_R3614
29.8
RHH5271_R3643
29.9
Naive CD8 T-cell nTPM: 4.9
Samples: 4
Max nTPM: 8.7
Min nTPM: 0.5
RHH5201_R3572
8.7
RHH5229_R3601
5.9
RHH5258_R3630
0.5
RHH5287_R3659
4.5
Non-Vd2 gdTCR nTPM: 10.9
Samples: 4
Max nTPM: 13.6
Min nTPM: 9.5
RHH5235_R3607
9.5
RHH5264_R3636
10.9
RHH5207_R3578
13.6
RHH5299_R3665
9.7
T-reg nTPM: 60.0
Samples: 4
Max nTPM: 77.5
Min nTPM: 48.5
RHH5301_R3667
63.4
RHH5237_R3609
48.5
RHH5266_R3638
77.5
RHH5209_R3580
50.7
Terminal effector memory CD4 T-cell nTPM: 88.9
Samples: 2
Max nTPM: 92.8
Min nTPM: 84.9
RHH5243_R3615
92.8
RHH5272_R3644
84.9
Terminal effector memory CD8 T-cell nTPM: 15.4
Samples: 4
Max nTPM: 23.1
Min nTPM: 4.2
RHH5232_R3604
20.1
RHH5204_R3575
4.2
RHH5261_R3633
23.1
RHH5296_R3662
14.3
Vd2 gdTCR nTPM: 48.8
Samples: 4
Max nTPM: 69.0
Min nTPM: 23.3
RHH5234_R3606
69.0
RHH5206_R3577
23.3
RHH5263_R3635
62.2
RHH5298_R3664
40.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
