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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
336.4
nTPM
Monaco:
661.9
nTPM
Schmiedel:
428.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
336.4
HPA sample
nTPM
gdT-cell nTPM: 243.3
Samples: 6
Max nTPM: 265.9
Min nTPM: 197.9
P10809_1007
265.4
P10809_1022
256.7
P10809_1041
247.2
P10809_1060
197.9
P10809_1077
226.9
P10809_1098
265.9
MAIT T-cell nTPM: 336.4
Samples: 6
Max nTPM: 414.4
Min nTPM: 273.5
P10809_1006
320.0
P10809_1024
392.3
P10809_1043
316.4
P10809_1062
301.7
P10809_1083
273.5
P10809_1097
414.4
Memory CD4 T-cell nTPM: 276.0
Samples: 6
Max nTPM: 317.3
Min nTPM: 252.9
P10809_1014
317.3
P10809_1026
279.9
P10809_1045
275.1
P10809_1064
252.9
P10809_1086
261.1
P10809_1113
269.9
Memory CD8 T-cell nTPM: 283.4
Samples: 5
Max nTPM: 298.3
Min nTPM: 258.2
P10809_1012
298.3
P10809_1027
291.1
P10809_1046
297.6
P10809_1065
271.9
P10809_1111
258.2
Naive CD4 T-cell nTPM: 278.8
Samples: 6
Max nTPM: 344.8
Min nTPM: 229.3
P10809_1015
344.8
P10809_1030
329.7
P10809_1049
261.6
P10809_1068
229.3
P10809_1085
269.5
P10809_1112
237.6
Naive CD8 T-cell nTPM: 302.6
Samples: 6
Max nTPM: 374.8
Min nTPM: 247.8
P10809_1016
374.8
P10809_1031
332.5
P10809_1050
321.4
P10809_1069
276.7
P10809_1087
262.1
P10809_1110
247.8
T-reg nTPM: 230.5
Samples: 6
Max nTPM: 262.4
Min nTPM: 204.4
P10809_1018
223.9
P10809_1037
227.6
P10809_1056
204.4
P10809_1075
223.9
P10809_1094
262.4
P10809_1106
240.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
661.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 513.2
Samples: 4
Max nTPM: 743.6
Min nTPM: 319.8
RHH5202_R3573
597.0
RHH5230_R3602
392.4
RHH5259_R3631
319.8
RHH5288_R3660
743.6
Effector memory CD8 T-cell nTPM: 435.8
Samples: 4
Max nTPM: 529.0
Min nTPM: 282.3
RHH5203_R3574
529.0
RHH5231_R3603
513.7
RHH5260_R3632
282.3
RHH5289_R3661
418.3
MAIT T-cell nTPM: 661.9
Samples: 4
Max nTPM: 897.3
Min nTPM: 391.8
RHH5233_R3605
703.8
RHH5205_R3576
391.8
RHH5262_R3634
654.6
RHH5297_R3663
897.3
Memory CD4 T-cell TFH nTPM: 556.1
Samples: 4
Max nTPM: 691.2
Min nTPM: 475.0
RHH5300_R3666
691.2
RHH5236_R3608
475.0
RHH5265_R3637
487.2
RHH5208_R3579
571.1
Memory CD4 T-cell Th1 nTPM: 497.8
Samples: 4
Max nTPM: 774.0
Min nTPM: 323.3
RHH5210_R3581
517.1
RHH5302_R3668
774.0
RHH5238_R3610
323.3
RHH5267_R3639
376.8
Memory CD4 T-cell Th1/Th17 nTPM: 496.7
Samples: 4
Max nTPM: 753.7
Min nTPM: 260.1
RHH5303_R3669
753.7
RHH5211_R3582
555.6
RHH5239_R3611
260.1
RHH5268_R3640
417.4
Memory CD4 T-cell Th17 nTPM: 407.2
Samples: 4
Max nTPM: 563.7
Min nTPM: 257.6
RHH5304_R3670
464.7
RHH5212_R3583
563.7
RHH5240_R3612
257.6
RHH5269_R3641
342.7
Memory CD4 T-cell Th2 nTPM: 585.7
Samples: 4
Max nTPM: 793.8
Min nTPM: 412.3
RHH5305_R3671
632.0
RHH5213_R3584
504.7
RHH5241_R3613
793.8
RHH5270_R3642
412.3
Naive CD4 T-cell nTPM: 507.5
Samples: 4
Max nTPM: 684.0
Min nTPM: 373.2
RHH5306_R3672
684.0
RHH5214_R3585
472.0
RHH5242_R3614
500.6
RHH5271_R3643
373.2
Naive CD8 T-cell nTPM: 475.9
Samples: 4
Max nTPM: 622.1
Min nTPM: 246.1
RHH5201_R3572
622.1
RHH5229_R3601
246.1
RHH5258_R3630
598.1
RHH5287_R3659
437.4
Non-Vd2 gdTCR nTPM: 544.2
Samples: 4
Max nTPM: 765.6
Min nTPM: 274.4
RHH5235_R3607
274.4
RHH5264_R3636
557.5
RHH5207_R3578
579.3
RHH5299_R3665
765.6
T-reg nTPM: 485.3
Samples: 4
Max nTPM: 810.3
Min nTPM: 330.2
RHH5301_R3667
810.3
RHH5237_R3609
470.0
RHH5266_R3638
330.2
RHH5209_R3580
330.5
Terminal effector memory CD4 T-cell nTPM: 531.2
Samples: 2
Max nTPM: 721.8
Min nTPM: 340.5
RHH5243_R3615
340.5
RHH5272_R3644
721.8
Terminal effector memory CD8 T-cell nTPM: 650.2
Samples: 4
Max nTPM: 867.9
Min nTPM: 354.7
RHH5232_R3604
562.8
RHH5204_R3575
815.4
RHH5261_R3633
354.7
RHH5296_R3662
867.9
Vd2 gdTCR nTPM: 592.7
Samples: 4
Max nTPM: 845.9
Min nTPM: 355.4
RHH5234_R3606
451.5
RHH5206_R3577
717.8
RHH5263_R3635
355.4
RHH5298_R3664
845.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.