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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
114.1
nTPM
Monaco:
109.4
nTPM
Schmiedel:
104.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
114.1
HPA sample
nTPM
gdT-cell nTPM: 71.5
Samples: 6
Max nTPM: 89.2
Min nTPM: 50.9
P10809_1007
50.9
P10809_1022
80.4
P10809_1041
89.2
P10809_1060
68.2
P10809_1077
60.6
P10809_1098
79.9
MAIT T-cell nTPM: 70.8
Samples: 6
Max nTPM: 95.5
Min nTPM: 53.9
P10809_1006
53.9
P10809_1024
95.5
P10809_1043
68.3
P10809_1062
61.2
P10809_1083
80.1
P10809_1097
65.7
Memory CD4 T-cell nTPM: 81.2
Samples: 6
Max nTPM: 94.7
Min nTPM: 59.1
P10809_1014
59.1
P10809_1026
76.8
P10809_1045
88.6
P10809_1064
80.8
P10809_1086
94.7
P10809_1113
87.2
Memory CD8 T-cell nTPM: 77.5
Samples: 5
Max nTPM: 93.1
Min nTPM: 51.5
P10809_1012
51.5
P10809_1027
93.1
P10809_1046
80.3
P10809_1065
80.2
P10809_1111
82.5
Naive CD4 T-cell nTPM: 73.7
Samples: 6
Max nTPM: 91.9
Min nTPM: 53.7
P10809_1015
53.7
P10809_1030
91.9
P10809_1049
88.5
P10809_1068
71.1
P10809_1085
72.1
P10809_1112
65.1
Naive CD8 T-cell nTPM: 75.0
Samples: 6
Max nTPM: 85.9
Min nTPM: 51.8
P10809_1016
51.8
P10809_1031
85.8
P10809_1050
66.9
P10809_1069
78.8
P10809_1087
85.9
P10809_1110
80.7
T-reg nTPM: 114.1
Samples: 6
Max nTPM: 133.2
Min nTPM: 87.5
P10809_1018
87.5
P10809_1037
127.3
P10809_1056
133.2
P10809_1075
108.1
P10809_1094
109.3
P10809_1106
118.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
109.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 80.3
Samples: 4
Max nTPM: 112.3
Min nTPM: 55.8
RHH5202_R3573
93.1
RHH5230_R3602
55.8
RHH5259_R3631
59.9
RHH5288_R3660
112.3
Effector memory CD8 T-cell nTPM: 78.4
Samples: 4
Max nTPM: 97.7
Min nTPM: 58.0
RHH5203_R3574
97.7
RHH5231_R3603
90.1
RHH5260_R3632
67.8
RHH5289_R3661
58.0
MAIT T-cell nTPM: 81.0
Samples: 4
Max nTPM: 121.1
Min nTPM: 58.6
RHH5233_R3605
71.9
RHH5205_R3576
58.6
RHH5262_R3634
72.2
RHH5297_R3663
121.1
Memory CD4 T-cell TFH nTPM: 94.3
Samples: 4
Max nTPM: 116.2
Min nTPM: 71.1
RHH5300_R3666
113.1
RHH5236_R3608
116.2
RHH5265_R3637
76.6
RHH5208_R3579
71.1
Memory CD4 T-cell Th1 nTPM: 103.4
Samples: 4
Max nTPM: 172.5
Min nTPM: 53.1
RHH5210_R3581
119.1
RHH5302_R3668
172.5
RHH5238_R3610
53.1
RHH5267_R3639
68.7
Memory CD4 T-cell Th1/Th17 nTPM: 90.5
Samples: 4
Max nTPM: 138.6
Min nTPM: 44.3
RHH5303_R3669
138.6
RHH5211_R3582
125.5
RHH5239_R3611
44.3
RHH5268_R3640
53.5
Memory CD4 T-cell Th17 nTPM: 68.9
Samples: 4
Max nTPM: 107.0
Min nTPM: 44.4
RHH5304_R3670
71.5
RHH5212_R3583
107.0
RHH5240_R3612
44.4
RHH5269_R3641
52.6
Memory CD4 T-cell Th2 nTPM: 78.5
Samples: 4
Max nTPM: 88.0
Min nTPM: 67.0
RHH5305_R3671
88.0
RHH5213_R3584
76.8
RHH5241_R3613
82.2
RHH5270_R3642
67.0
Naive CD4 T-cell nTPM: 82.9
Samples: 4
Max nTPM: 122.3
Min nTPM: 58.6
RHH5306_R3672
88.4
RHH5214_R3585
122.3
RHH5242_R3614
62.1
RHH5271_R3643
58.6
Naive CD8 T-cell nTPM: 62.7
Samples: 4
Max nTPM: 83.8
Min nTPM: 23.7
RHH5201_R3572
77.7
RHH5229_R3601
23.7
RHH5258_R3630
83.8
RHH5287_R3659
65.5
Non-Vd2 gdTCR nTPM: 85.7
Samples: 4
Max nTPM: 111.2
Min nTPM: 23.4
RHH5235_R3607
23.4
RHH5264_R3636
109.9
RHH5207_R3578
98.3
RHH5299_R3665
111.2
T-reg nTPM: 88.3
Samples: 4
Max nTPM: 116.6
Min nTPM: 55.3
RHH5301_R3667
116.6
RHH5237_R3609
111.2
RHH5266_R3638
55.3
RHH5209_R3580
69.9
Terminal effector memory CD4 T-cell nTPM: 52.9
Samples: 2
Max nTPM: 72.1
Min nTPM: 33.7
RHH5243_R3615
33.7
RHH5272_R3644
72.1
Terminal effector memory CD8 T-cell nTPM: 109.4
Samples: 4
Max nTPM: 182.0
Min nTPM: 65.5
RHH5232_R3604
79.3
RHH5204_R3575
182.0
RHH5261_R3633
65.5
RHH5296_R3662
110.8
Vd2 gdTCR nTPM: 89.4
Samples: 4
Max nTPM: 140.2
Min nTPM: 53.0
RHH5234_R3606
56.3
RHH5206_R3577
140.2
RHH5263_R3635
53.0
RHH5298_R3664
108.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
