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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
173.6
nTPM
Monaco:
144.7
nTPM
Schmiedel:
806.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
173.6
HPA sample
nTPM
gdT-cell nTPM: 94.9
Samples: 6
Max nTPM: 108.8
Min nTPM: 70.4
P10809_1007
84.8
P10809_1022
108.8
P10809_1041
105.9
P10809_1060
70.4
P10809_1077
104.0
P10809_1098
95.6
MAIT T-cell nTPM: 91.3
Samples: 6
Max nTPM: 130.8
Min nTPM: 67.0
P10809_1006
85.6
P10809_1024
130.8
P10809_1043
67.0
P10809_1062
79.3
P10809_1083
92.1
P10809_1097
92.8
Memory CD4 T-cell nTPM: 94.2
Samples: 6
Max nTPM: 127.6
Min nTPM: 83.7
P10809_1014
87.4
P10809_1026
87.2
P10809_1045
84.6
P10809_1064
83.7
P10809_1086
127.6
P10809_1113
94.6
Memory CD8 T-cell nTPM: 99.6
Samples: 5
Max nTPM: 114.8
Min nTPM: 86.3
P10809_1012
114.7
P10809_1027
86.3
P10809_1046
91.1
P10809_1065
90.9
P10809_1111
114.8
Naive CD4 T-cell nTPM: 69.6
Samples: 6
Max nTPM: 89.8
Min nTPM: 54.5
P10809_1015
54.5
P10809_1030
72.4
P10809_1049
62.3
P10809_1068
67.9
P10809_1085
89.8
P10809_1112
70.9
Naive CD8 T-cell nTPM: 80.1
Samples: 6
Max nTPM: 125.4
Min nTPM: 57.8
P10809_1016
57.8
P10809_1031
76.8
P10809_1050
72.6
P10809_1069
75.8
P10809_1087
125.4
P10809_1110
72.2
T-reg nTPM: 173.6
Samples: 6
Max nTPM: 249.1
Min nTPM: 135.8
P10809_1018
140.4
P10809_1037
193.2
P10809_1056
145.2
P10809_1075
135.8
P10809_1094
249.1
P10809_1106
177.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
144.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 102.2
Samples: 4
Max nTPM: 191.6
Min nTPM: 51.7
RHH5202_R3573
191.6
RHH5230_R3602
51.7
RHH5259_R3631
97.4
RHH5288_R3660
68.2
Effector memory CD8 T-cell nTPM: 144.8
Samples: 4
Max nTPM: 273.7
Min nTPM: 94.5
RHH5203_R3574
273.7
RHH5231_R3603
95.0
RHH5260_R3632
115.8
RHH5289_R3661
94.5
MAIT T-cell nTPM: 92.6
Samples: 4
Max nTPM: 135.8
Min nTPM: 60.5
RHH5233_R3605
80.3
RHH5205_R3576
135.8
RHH5262_R3634
93.7
RHH5297_R3663
60.5
Memory CD4 T-cell TFH nTPM: 93.4
Samples: 4
Max nTPM: 149.0
Min nTPM: 53.0
RHH5300_R3666
53.0
RHH5236_R3608
94.9
RHH5265_R3637
76.8
RHH5208_R3579
149.0
Memory CD4 T-cell Th1 nTPM: 107.0
Samples: 4
Max nTPM: 147.0
Min nTPM: 82.8
RHH5210_R3581
147.0
RHH5302_R3668
84.2
RHH5238_R3610
82.8
RHH5267_R3639
113.9
Memory CD4 T-cell Th1/Th17 nTPM: 87.1
Samples: 4
Max nTPM: 115.8
Min nTPM: 64.5
RHH5303_R3669
73.7
RHH5211_R3582
115.8
RHH5239_R3611
64.5
RHH5268_R3640
94.2
Memory CD4 T-cell Th17 nTPM: 90.6
Samples: 4
Max nTPM: 139.3
Min nTPM: 67.8
RHH5304_R3670
67.8
RHH5212_R3583
139.3
RHH5240_R3612
73.8
RHH5269_R3641
81.6
Memory CD4 T-cell Th2 nTPM: 86.0
Samples: 4
Max nTPM: 125.8
Min nTPM: 55.8
RHH5305_R3671
55.8
RHH5213_R3584
125.8
RHH5241_R3613
80.6
RHH5270_R3642
81.7
Naive CD4 T-cell nTPM: 62.8
Samples: 4
Max nTPM: 104.0
Min nTPM: 43.1
RHH5306_R3672
45.2
RHH5214_R3585
104.0
RHH5242_R3614
58.9
RHH5271_R3643
43.1
Naive CD8 T-cell nTPM: 70.7
Samples: 4
Max nTPM: 79.6
Min nTPM: 63.0
RHH5201_R3572
72.7
RHH5229_R3601
79.6
RHH5258_R3630
67.6
RHH5287_R3659
63.0
Non-Vd2 gdTCR nTPM: 80.1
Samples: 4
Max nTPM: 116.5
Min nTPM: 54.9
RHH5235_R3607
76.9
RHH5264_R3636
72.0
RHH5207_R3578
116.5
RHH5299_R3665
54.9
T-reg nTPM: 84.9
Samples: 4
Max nTPM: 125.8
Min nTPM: 48.2
RHH5301_R3667
48.2
RHH5237_R3609
89.4
RHH5266_R3638
76.3
RHH5209_R3580
125.8
Terminal effector memory CD4 T-cell nTPM: 83.0
Samples: 2
Max nTPM: 105.4
Min nTPM: 60.6
RHH5243_R3615
105.4
RHH5272_R3644
60.6
Terminal effector memory CD8 T-cell nTPM: 87.6
Samples: 4
Max nTPM: 102.3
Min nTPM: 72.8
RHH5232_R3604
72.8
RHH5204_R3575
102.3
RHH5261_R3633
85.2
RHH5296_R3662
90.2
Vd2 gdTCR nTPM: 83.1
Samples: 4
Max nTPM: 124.2
Min nTPM: 60.3
RHH5234_R3606
73.0
RHH5206_R3577
124.2
RHH5263_R3635
75.0
RHH5298_R3664
60.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
