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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
72.4
nTPM
Monaco:
232.8
nTPM
Schmiedel:
159.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
72.4
HPA sample
nTPM
gdT-cell nTPM: 50.6
Samples: 6
Max nTPM: 61.0
Min nTPM: 37.5
P10809_1007
37.5
P10809_1022
61.0
P10809_1041
54.6
P10809_1060
57.7
P10809_1077
47.3
P10809_1098
45.5
MAIT T-cell nTPM: 69.4
Samples: 6
Max nTPM: 85.5
Min nTPM: 54.4
P10809_1006
60.6
P10809_1024
85.5
P10809_1043
54.4
P10809_1062
75.1
P10809_1083
58.3
P10809_1097
82.7
Memory CD4 T-cell nTPM: 64.6
Samples: 6
Max nTPM: 69.3
Min nTPM: 55.1
P10809_1014
67.2
P10809_1026
55.1
P10809_1045
69.3
P10809_1064
65.4
P10809_1086
64.2
P10809_1113
66.4
Memory CD8 T-cell nTPM: 56.3
Samples: 5
Max nTPM: 66.0
Min nTPM: 37.6
P10809_1012
62.2
P10809_1027
37.6
P10809_1046
56.5
P10809_1065
66.0
P10809_1111
59.3
Naive CD4 T-cell nTPM: 72.4
Samples: 6
Max nTPM: 92.4
Min nTPM: 54.7
P10809_1015
79.0
P10809_1030
64.3
P10809_1049
54.7
P10809_1068
92.4
P10809_1085
74.0
P10809_1112
70.0
Naive CD8 T-cell nTPM: 61.8
Samples: 6
Max nTPM: 75.8
Min nTPM: 54.0
P10809_1016
63.3
P10809_1031
54.0
P10809_1050
58.4
P10809_1069
75.8
P10809_1087
59.1
P10809_1110
59.9
T-reg nTPM: 61.8
Samples: 6
Max nTPM: 78.2
Min nTPM: 47.3
P10809_1018
60.6
P10809_1037
78.2
P10809_1056
47.3
P10809_1075
67.5
P10809_1094
56.0
P10809_1106
61.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
232.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 183.5
Samples: 4
Max nTPM: 205.5
Min nTPM: 170.1
RHH5202_R3573
177.6
RHH5230_R3602
180.9
RHH5259_R3631
205.5
RHH5288_R3660
170.1
Effector memory CD8 T-cell nTPM: 232.8
Samples: 4
Max nTPM: 294.6
Min nTPM: 157.3
RHH5203_R3574
157.3
RHH5231_R3603
235.3
RHH5260_R3632
243.9
RHH5289_R3661
294.6
MAIT T-cell nTPM: 183.3
Samples: 4
Max nTPM: 210.4
Min nTPM: 157.2
RHH5233_R3605
177.2
RHH5205_R3576
210.4
RHH5262_R3634
188.4
RHH5297_R3663
157.2
Memory CD4 T-cell TFH nTPM: 186.7
Samples: 4
Max nTPM: 236.5
Min nTPM: 153.2
RHH5300_R3666
153.2
RHH5236_R3608
172.5
RHH5265_R3637
184.7
RHH5208_R3579
236.5
Memory CD4 T-cell Th1 nTPM: 175.2
Samples: 4
Max nTPM: 185.8
Min nTPM: 161.3
RHH5210_R3581
185.8
RHH5302_R3668
161.3
RHH5238_R3610
173.9
RHH5267_R3639
179.7
Memory CD4 T-cell Th1/Th17 nTPM: 216.2
Samples: 4
Max nTPM: 297.7
Min nTPM: 179.9
RHH5303_R3669
190.0
RHH5211_R3582
179.9
RHH5239_R3611
297.7
RHH5268_R3640
197.1
Memory CD4 T-cell Th17 nTPM: 231.0
Samples: 4
Max nTPM: 312.8
Min nTPM: 177.7
RHH5304_R3670
208.9
RHH5212_R3583
177.7
RHH5240_R3612
312.8
RHH5269_R3641
224.6
Memory CD4 T-cell Th2 nTPM: 181.4
Samples: 4
Max nTPM: 195.5
Min nTPM: 174.4
RHH5305_R3671
175.7
RHH5213_R3584
180.1
RHH5241_R3613
174.4
RHH5270_R3642
195.5
Naive CD4 T-cell nTPM: 163.4
Samples: 4
Max nTPM: 186.1
Min nTPM: 146.4
RHH5306_R3672
153.1
RHH5214_R3585
146.4
RHH5242_R3614
167.8
RHH5271_R3643
186.1
Naive CD8 T-cell nTPM: 161.7
Samples: 4
Max nTPM: 194.0
Min nTPM: 142.3
RHH5201_R3572
146.4
RHH5229_R3601
194.0
RHH5258_R3630
142.3
RHH5287_R3659
164.1
Non-Vd2 gdTCR nTPM: 174.7
Samples: 4
Max nTPM: 209.9
Min nTPM: 135.5
RHH5235_R3607
163.6
RHH5264_R3636
209.9
RHH5207_R3578
189.8
RHH5299_R3665
135.5
T-reg nTPM: 142.8
Samples: 4
Max nTPM: 171.8
Min nTPM: 113.2
RHH5301_R3667
113.2
RHH5237_R3609
146.5
RHH5266_R3638
139.7
RHH5209_R3580
171.8
Terminal effector memory CD4 T-cell nTPM: 202.8
Samples: 2
Max nTPM: 213.8
Min nTPM: 191.8
RHH5243_R3615
191.8
RHH5272_R3644
213.8
Terminal effector memory CD8 T-cell nTPM: 187.0
Samples: 4
Max nTPM: 236.6
Min nTPM: 129.3
RHH5232_R3604
236.6
RHH5204_R3575
129.3
RHH5261_R3633
226.2
RHH5296_R3662
156.0
Vd2 gdTCR nTPM: 184.4
Samples: 4
Max nTPM: 233.8
Min nTPM: 124.1
RHH5234_R3606
201.9
RHH5206_R3577
177.8
RHH5263_R3635
233.8
RHH5298_R3664
124.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
